Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 633 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Pseudomonas stutzeri RCH2

 Score =  646 bits (1666), Expect = 0.0
 Identities = 339/643 (52%), Positives = 444/643 (69%), Gaps = 17/643 (2%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           M+L++  + SLAYG TPLL    + I RGERVCI+GRNG GKSS+L+++ GD   D+GE 
Sbjct: 1   MTLLKFTDVSLAYGTTPLLDGVSWQIARGERVCIIGRNGTGKSSMLRLVKGDRSADDGEI 60

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERML 120
                + +  L Q+ P+A+  TV+  +A GL  VGE L +YH LS ++      Q E  L
Sbjct: 61  WRAPGLKIGELPQELPRADDRTVFDVVAEGLAGVGELLAEYHHLSQNI------QDEADL 114

Query: 121 NQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDL 180
            ++  +Q+ L+  +GW+L   ++     L L  D++L+ELSGGW+R+V LA+ALVS PDL
Sbjct: 115 EKLMHVQQALEAKDGWRLQQLVDSTLSRLQLPADRTLAELSGGWRRRVLLAQALVSEPDL 174

Query: 181 LLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGN 240
           LLLDEPTNHLDI  I WLE+ L  F GA++FI+HDR F+  +ATRI++LDRG +  W G+
Sbjct: 175 LLLDEPTNHLDIGAIAWLEEALTGFNGAVLFITHDRAFLQNLATRILELDRGHLIDWNGD 234

Query: 241 YQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSE 300
           Y ++L  K++ L  E   NALFDK+LA EEVWIRQG+KARRTRNEGRVRALKALR ERSE
Sbjct: 235 YASFLVHKEQQLAAEETANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRAERSE 294

Query: 301 RLNRQGNAKMAVADTERSGKLVFDVKDLNY-NLPDKNLVKNFNTTVLRGDRIALIGPNGC 359
           R N QG A   V   E+SGK V   + + + ++  + L+++F+  + RGDRI L+G NG 
Sbjct: 295 RRNVQGKATFQVETAEKSGKQVIVAEQVTFAHVGGEPLIRDFSMVIQRGDRIGLLGANGT 354

Query: 360 GKSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQ 419
           GK+TL+KLL+ +L P SG ++ GTKLE+AYFDQ R  L+ E+TV DN+ EG++ ITI+GQ
Sbjct: 355 GKTTLLKLLLGELHPSSGSIEFGTKLEVAYFDQLRHQLELEKTVVDNLAEGREFITIDGQ 414

Query: 420 DRHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETL 479
           +RH+LSYL DFLFSP RARTPVKALSGGE+ RLLLAKL  +PANL++LDEPTNDLD+ETL
Sbjct: 415 NRHVLSYLGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETL 474

Query: 480 ELLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGAKFYSE 539
           ELLE +L  ++GT+L+VSHDRAF+DN VTS+  + G G   EYVGGYQD + QG      
Sbjct: 475 ELLEEVLLGFQGTVLMVSHDRAFLDNVVTSTLVFQGGGEVREYVGGYQDWLRQGG----- 529

Query: 540 EPSQTNTVEAPATAKTAE-----VKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAEILE 594
            P      E+   AK A+       VAE A A KKLSYK QRELEA+P  +++ E  I  
Sbjct: 530 SPRLLGVAESGGEAKKAQQAPVAAVVAEVAPAKKKLSYKLQRELEALPGQIDEAEKAIEA 589

Query: 595 LQTTVASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELE 637
           LQ  ++ P FY Q  DK   VLS L   + +L+   ERW ELE
Sbjct: 590 LQAEISDPAFYQQAADKTAAVLSRLEALQAELDGLLERWAELE 632