Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  622 bits (1605), Expect = 0.0
 Identities = 327/641 (51%), Positives = 439/641 (68%), Gaps = 10/641 (1%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           M+L++ ++ SLA+G  PLL    + I RGERVCI+GRNG GKSS+LK++ G    DEG  
Sbjct: 1   MTLLKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMLKLVKGVQKPDEGAV 60

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERML 120
                + +  L Q+ P A+  TV+  +A GL  VG  L +YH L+ +    E       L
Sbjct: 61  WRAPGLKIGELPQELPVADGRTVFDVVAEGLDGVGALLAEYHHLAQNCVTEED------L 114

Query: 121 NQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDL 180
           N++  +Q+ L+  +GW+L   +      L L  DK+L+ELSGGW+R+V LA+ALVS PDL
Sbjct: 115 NKLMHVQQDLEARDGWRLQQLVESTLSRLQLPADKTLAELSGGWRRRVLLAQALVSEPDL 174

Query: 181 LLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGN 240
           LLLDEPTNHLDI  I WLE+ L DFQGA++FI+HDR F+  +ATRI++LDRG +  W G+
Sbjct: 175 LLLDEPTNHLDIGAIAWLEEALKDFQGAVLFITHDRAFLQNLATRILELDRGGLIDWDGD 234

Query: 241 YQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSE 300
           Y ++L  K+  L  E   NALFDKRLA EEVWIRQG+KARRTRNEGRVRALK LR ERSE
Sbjct: 235 YASFLVHKEAALAAEETANALFDKRLAQEEVWIRQGIKARRTRNEGRVRALKELRVERSE 294

Query: 301 RLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPD-KNLVKNFNTTVLRGDRIALIGPNGC 359
           R  R G A + +   E+SGK V  + ++++  P    L+K+F+  + R DRI L+G NG 
Sbjct: 295 RRERTGKANIQLDTAEKSGKQVMVLDNVSFAHPGGPTLIKDFSMVLQREDRIGLLGANGT 354

Query: 360 GKSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQ 419
           GK+TL+KL+++ LQP  G+V+VGT+L++AYFDQ R  LD E+TV DNV EG+  I I+GQ
Sbjct: 355 GKTTLLKLMLDNLQPTGGKVEVGTRLDVAYFDQLRHQLDLEKTVIDNVAEGRDFIDIDGQ 414

Query: 420 DRHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETL 479
            RH+LSYL DFLFSP RARTPVKALSGGE+ RLLLAKL  +PANL++LDEPTNDLD+ETL
Sbjct: 415 SRHVLSYLGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETL 474

Query: 480 ELLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGA--KFY 537
           ELLE +L  ++GT+L+VSHDRAF+DN VTS+  + G G   EYVGGYQD + QG   +  
Sbjct: 475 ELLEEVLLTFKGTVLMVSHDRAFLDNVVTSTLVFEGEGKVREYVGGYQDWLRQGGSPRLL 534

Query: 538 SEEPSQTNTVE-APATAKTAEVKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAEILELQ 596
               +++   E A A  + A V   +   A KKLSYK QRELEA+P  ++++E ++  L 
Sbjct: 535 GVADTKSGKAELASAVVQAAPVAAQDMPVAKKKLSYKLQRELEALPAQIDEVEGKMAALN 594

Query: 597 TTVASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELE 637
             +A P FY ++ ++   VL+ L + + +L+   ERW EL+
Sbjct: 595 AEMAEPGFYQRSSEQTAAVLAQLENLQAELDKLLERWAELD 635