Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 613 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  426 bits (1096), Expect = e-123
 Identities = 254/643 (39%), Positives = 362/643 (56%), Gaps = 49/643 (7%)

Query: 3   LVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEFNI 62
           ++++++  L +G TPLL  A   +E G+R+C+VGRNG+GKS+L+KI +G      GE   
Sbjct: 5   ILKLDDILLTFGGTPLLAGAGLQVEPGDRICLVGRNGSGKSTLMKIAAGLAEPQSGEIFR 64

Query: 63  DGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERMLNQ 122
             SVT+  L Q P      TV AY  AGL    +     + L H                
Sbjct: 65  HPSVTIRYLHQAPDFDGFDTVQAYAEAGLGPGDDPYRVAYLLQH---------------- 108

Query: 123 MQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDLLL 182
                                     LGL  ++  + LSGG  R+ ALAR L   PD+LL
Sbjct: 109 --------------------------LGLTGEEEPTRLSGGEARRAALARVLAPEPDILL 142

Query: 183 LDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGNYQ 242
           LDEPTNHLD+ TIEWLE  L+  + A+V ISHDR F+ +++T  V LDRG        + 
Sbjct: 143 LDEPTNHLDLPTIEWLEDELVRSRSALVLISHDRRFLEKVSTATVWLDRGQSRRLDRGFA 202

Query: 243 AYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSERL 302
            +   + E L  E  +     K +  EE W+R GV ARR RN  R+  L+ +R       
Sbjct: 203 HFEAWRDEVLEAEELEQHKLGKAIEREEHWLRYGVTARRKRNMRRLGELQDMRARHRGHK 262

Query: 303 NRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNGCGKS 362
             QG  +  VAD   SGKLV + + +     D+ +V  F+  V RGDRI L+GPNG GK+
Sbjct: 263 GPQGTVQATVADARESGKLVIEAEKITKAYGDRTIVAPFSIRVHRGDRIGLVGPNGAGKT 322

Query: 363 TLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGK-KTITINGQDR 421
           TL+KLL  +L P +G VK+GT LEIA  DQ RE L+ ++T+   + +G+ +T+ +NG+ R
Sbjct: 323 TLLKLLTGQLAPDTGSVKLGTNLEIATLDQKREELNLDETLAHYLTDGRGETLLVNGEQR 382

Query: 422 HILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETLEL 481
           H+  Y+++FLF P +ARTP++ LSGGE+ RL+LA++L RP NL+ILDEPTNDLDIETL+L
Sbjct: 383 HVTGYMKEFLFQPEQARTPIRDLSGGERARLMLARILARPTNLLILDEPTNDLDIETLDL 442

Query: 482 LESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAG----NGHWTEYVGGYQDAIDQGAKFY 537
           L+ ++  + GT++LVSHDR F+D TVTS+   A     +G W EY GGY D + Q  +  
Sbjct: 443 LQEIVAGFSGTVILVSHDRDFLDRTVTSTIAPANPEAPDGRWIEYAGGYSDMMAQ-RRGA 501

Query: 538 SEEPSQTNTVEAPATAKTAEVKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAEILELQT 597
            EE  ++   E  A +  A    +EP KA  KLS+K +  LE +P+ + + EAEI + + 
Sbjct: 502 LEERRRSEKAE-KARSSGASSSPSEPQKAKGKLSFKQKFALENLPKEIARSEAEIAKREE 560

Query: 598 TVASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELESLK 640
            +A PD +S+  +   ++ + L      L    E W ELE L+
Sbjct: 561 KMADPDLFSRDPNGFAKLAAELEKLRTDLTRMEEEWLELEMLR 603