Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 639 a.a., ABC transporter ATPase component (RefSeq) from Shewanella loihica PV-4

 Score = 1052 bits (2721), Expect = 0.0
 Identities = 520/640 (81%), Positives = 576/640 (90%), Gaps = 1/640 (0%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           MSLVRINNGSLAYGYTPLLQNADFTIE GERVCIVGRNGAGKSSL+K++ G+VLLD+GEF
Sbjct: 1   MSLVRINNGSLAYGYTPLLQNADFTIEPGERVCIVGRNGAGKSSLMKVIGGEVLLDDGEF 60

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERML 120
           NI   V VSRLQQDPPKAEQGTVYAYI+AGL+EVGE LE+YHQLSHDVA  + ++MER+L
Sbjct: 61  NIANDVKVSRLQQDPPKAEQGTVYAYISAGLQEVGEKLERYHQLSHDVAHVDAQEMERLL 120

Query: 121 NQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDL 180
            QM++LQ  LDH NGWQLD+RINQ CELLGLD D SL+ LSGGWQRKVALARALVS PDL
Sbjct: 121 KQMERLQSDLDHLNGWQLDTRINQTCELLGLDADASLASLSGGWQRKVALARALVSEPDL 180

Query: 181 LLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGN 240
           LLLDEPTNHLDIDTIEWLE+FLL+++GAIVFISHDRGFI RMATRIVDLDRGVVTSWPG+
Sbjct: 181 LLLDEPTNHLDIDTIEWLEEFLLNYRGAIVFISHDRGFIQRMATRIVDLDRGVVTSWPGD 240

Query: 241 YQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSE 300
           YQ YLDGK EWLRVE EKNA FDK+LA+EE WIRQG+KARRTRNEGRVRALKALR ER E
Sbjct: 241 YQTYLDGKAEWLRVEEEKNAQFDKKLAEEEAWIRQGIKARRTRNEGRVRALKALRMERME 300

Query: 301 RLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNGCG 360
           R+NRQG AKMAVADTERSGKLVFD+KDLNYNLPDKNLVKNF T+V+RGDRIALIGPNGCG
Sbjct: 301 RINRQGGAKMAVADTERSGKLVFDIKDLNYNLPDKNLVKNFTTSVMRGDRIALIGPNGCG 360

Query: 361 KSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQD 420
           KSTLIKLLI +L PQSGEVKVGTKLE+AYFDQYREALDPE+TVEDNVGEGKKT+TINGQD
Sbjct: 361 KSTLIKLLIGQLAPQSGEVKVGTKLEVAYFDQYREALDPEKTVEDNVGEGKKTVTINGQD 420

Query: 421 RHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETLE 480
           RHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLA+LL+RPANLIILDEPTNDLDIETLE
Sbjct: 421 RHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLARLLLRPANLIILDEPTNDLDIETLE 480

Query: 481 LLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGAKFYSEE 540
           LLESLLT+Y+GTLLLVSHDRAFIDNTVTSSWW+ GNG W+EYVGGYQDA+ QGAKFYSEE
Sbjct: 481 LLESLLTDYQGTLLLVSHDRAFIDNTVTSSWWFTGNGGWSEYVGGYQDAVSQGAKFYSEE 540

Query: 541 PSQTNTVEAPATAKTAEVKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAEILELQTTVA 600
           P   + V+ P  A+  + +    AKA KKLSYK QREL+A+P  ME+LEAEI  LQ  + 
Sbjct: 541 PVAKDAVQ-PKVAEPVKRETKAAAKAEKKLSYKLQRELDALPAKMEQLEAEIESLQAVIN 599

Query: 601 SPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELESLK 640
            PDFY+Q QD ++  L+ LA+ E++LEVCFERWEELE+LK
Sbjct: 600 EPDFYTQAQDLVSSRLNELAELEQELEVCFERWEELEALK 639