Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., ABC transporter ATPase component from Marinobacter adhaerens HP15

 Score =  605 bits (1559), Expect = e-177
 Identities = 313/636 (49%), Positives = 421/636 (66%), Gaps = 22/636 (3%)

Query: 17  PLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEFNIDGSVTVSRLQQDPP 76
           PLL  A   I+ GERVC++GRNG GKS+LLKI+SG+V  D G   +D    ++ L Q+ P
Sbjct: 3   PLLDQASLVIDAGERVCLLGRNGEGKSTLLKIVSGEVTPDGGVVRLDDGAVLAVLPQNLP 62

Query: 77  KAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMERMLNQMQKLQETLDHHNGW 136
             +  T Y  +A    E G+ L ++HQLS        +  E  L+++ K+QE L+  +GW
Sbjct: 63  SEDTRTAYEVVAGAFPETGKLLAEFHQLSQ-------QGDEASLDRLMKVQERLEALDGW 115

Query: 137 QLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDLLLLDEPTNHLDIDTIE 196
           +LD ++       G+DPD++L  LSGGWQR+V LA+ALV+ PD+LLLDEPTNHLD+  I 
Sbjct: 116 RLDQKVTTILGQYGVDPDQTLDTLSGGWQRRVLLAKALVADPDILLLDEPTNHLDVPAIA 175

Query: 197 WLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGNYQAYLDGKQEWLRVEA 256
           WLE+ L  F+GA++F+SHDR FI RMATRIV+LDRG + S+   Y  YLD K++ L  E 
Sbjct: 176 WLEEALGQFRGAMLFVSHDRAFIRRMATRIVELDRGKLVSFAATYDRYLDLKEKALEEEE 235

Query: 257 EKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQERSERLNRQGNAKMAVADTE 316
            +NALFDKRL  EE WIRQG+KARRTRN GRVRALKA+R+E  +R  R G A  AV D  
Sbjct: 236 RQNALFDKRLKQEEAWIRQGIKARRTRNMGRVRALKAMREEHRQRRVRGGTATFAVEDAA 295

Query: 317 RSGKLVFDVKDLNYNLPDKN-LVKNFNTTVLRGDRIALIGPNGCGKSTLIKLLIEKLQPQ 375
           RSGKLV + +D  +  PD   ++++ N T+LRGD+I L+G NG GK+TL++LL+  L+P 
Sbjct: 296 RSGKLVVETRDAGFAYPDGTPVIRDMNLTILRGDKIGLVGENGTGKTTLVRLLLGNLEPT 355

Query: 376 SGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITINGQDRHILSYLQDFLFSPM 435
            G +++GT L++AYFDQ R  LD  +   DN+ EG++ I INGQ +H+L YLQ+FLF+P 
Sbjct: 356 EGSIRLGTNLQVAYFDQLRGELDLTRNALDNLSEGREFIDINGQSKHVLGYLQEFLFTPE 415

Query: 436 RARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIETLELLESLLTEYEGTLLL 495
           RAR+PV   SGGE+ RLLLAKL  +PAN+++LDEPTNDLD+ETLELLE  L E+ GT+++
Sbjct: 416 RARSPVSVFSGGERARLLLAKLFSKPANILVLDEPTNDLDVETLELLEEQLAEFAGTVIV 475

Query: 496 VSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQDAIDQGAKFYSE------EPSQTNTVEA 549
           +SHDR F+DN +T + +  G+G   EYVGGY D   QG  F SE      +    N   +
Sbjct: 476 ISHDREFLDNVITETVFLDGSGKVREYVGGYTDWRRQGGCFPSEATGNRPDKQDKNGKTS 535

Query: 550 PATAKTAEVKVAEPAKAAK--------KLSYKFQRELEAMPELMEKLEAEILELQTTVAS 601
            +T K    K AE AK           KLSYK + ELE +P  +E+LE E+  LQ  ++ 
Sbjct: 536 GSTEKVVSKKPAENAKPRAEPEKGKPVKLSYKLKLELEQLPGQIEELEQEVAGLQEIISQ 595

Query: 602 PDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELE 637
            DFYS   D+++  L  L +KE +LE   ERW ELE
Sbjct: 596 ADFYSGPPDEVSATLEALTEKENRLEQVIERWMELE 631



 Score = 91.7 bits (226), Expect = 9e-23
 Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 43/239 (17%)

Query: 16  TPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEFNIDGSVTVSRLQQDP 75
           TP++++ + TI RG+++ +VG NG GK++L+++L G++   EG   +  ++ V+   Q  
Sbjct: 315 TPVIRDMNLTILRGDKIGLVGENGTGKTTLVRLLLGNLEPTEGSIRLGTNLQVAYFDQ-- 372

Query: 76  PKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPE-QMERMLNQMQKLQETLDHHN 134
                      +   L     AL+    LS    F +   Q + +L  +Q+   T +   
Sbjct: 373 -----------LRGELDLTRNALD---NLSEGREFIDINGQSKHVLGYLQEFLFTPERAR 418

Query: 135 GWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAPDLLLLDEPTNHLDIDT 194
                                 +S  SGG + ++ LA+      ++L+LDEPTN LD++T
Sbjct: 419 --------------------SPVSVFSGGERARLLLAKLFSKPANILVLDEPTNDLDVET 458

Query: 195 IEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGNYQAYLDGKQEWLR 253
           +E LE+ L +F G ++ ISHDR F+  + T  V LD        G  + Y+ G  +W R
Sbjct: 459 LELLEEQLAEFAGTVIVISHDREFLDNVITETVFLDGS------GKVREYVGGYTDWRR 511