Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 649 a.a., ATP-binding cassette, subfamily F, uup from Paraburkholderia bryophila 376MFSha3.1

 Score =  567 bits (1460), Expect = e-166
 Identities = 297/646 (45%), Positives = 424/646 (65%), Gaps = 10/646 (1%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           MSL  I    LA+G+  LL +ADF++E GERV ++GRNGAGKSSLLKI++     D+G  
Sbjct: 1   MSLYTITGAQLAFGHVALLDHADFSLESGERVGLIGRNGAGKSSLLKIVAELAKPDDGLV 60

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPE--QMER 118
               ++T   + Q+P      TV+  +AAGL      L++Y  +++ +A  EPE  Q + 
Sbjct: 61  TRQQNLTTVYVPQEPEFDTDDTVFDAVAAGLTHARALLDEYDAVANQLA-DEPEGAQHDA 119

Query: 119 MLNQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAP 178
           ++ +M  LQ +LD  + W   +R+    + +GL+ +  +  LSGG Q++VALARALV  P
Sbjct: 120 LMARMNTLQSSLDAADAWNWSTRVATTLQQIGLNGEARVGSLSGGMQKRVALARALVVQP 179

Query: 179 DLLLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWP 238
           D+LLLDEPTNHLD D I WLE  L+  + A++FI+HDR F+ R+ATRIV+LDRG + S+P
Sbjct: 180 DVLLLDEPTNHLDFDGIRWLEDLLVSQRAALLFITHDRAFLDRVATRIVELDRGRLLSYP 239

Query: 239 GNYQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQER 298
           GN+ AY   K + L +E  +N   DK LA EEVWIR+GV+ARRTR+ GR+  L  +R +R
Sbjct: 240 GNFSAYQTRKAQQLEIERVENEKADKLLAQEEVWIRKGVEARRTRSVGRIARLVEMRNQR 299

Query: 299 SERLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNG 358
           +ER N QGN K+ V   E+SGK+V ++ D+      + ++ +F  TV+RGD+I  +GPNG
Sbjct: 300 AERRNVQGNVKLDVGQGEKSGKIVAELTDVTKRYGSRTVIDSFTATVMRGDKIGFVGPNG 359

Query: 359 CGKSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITING 418
            GK+TL+K+++ +LQP  G V+VGT L++AYFDQ R  LD ++++ D +  G + + +NG
Sbjct: 360 AGKTTLLKIILGELQPDEGTVRVGTNLQVAYFDQMRAQLDLDKSLADTISPGSEWVEVNG 419

Query: 419 QDRHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIET 478
           Q +H++SYL DFLF+P RAR+PVK+LSGGE+NRLLLA+L  RPAN+++LDEPTNDLDI T
Sbjct: 420 QKKHVMSYLGDFLFAPERARSPVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIPT 479

Query: 479 LELLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGYQD---AIDQGAK 535
           LELLE LLT+Y+GT+LLVSHDRAF+DN  TS     G G W EYVGG+ D      +  +
Sbjct: 480 LELLEELLTDYDGTVLLVSHDRAFLDNVATSVIASEGGGKWREYVGGFTDWQIQSQRSQQ 539

Query: 536 FYSEEPSQTNTVEAPATAKTAEVKVAEPA----KAAKKLSYKFQRELEAMPELMEKLEAE 591
              E   + N   A  +AK +      PA    + A KLS+K QRELEA+PE +  LEAE
Sbjct: 540 MAQEAQKEANKDAAKDSAKDSAASKDSPAGRNTQRAAKLSFKEQRELEALPEKIAALEAE 599

Query: 592 ILELQTTVASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELE 637
              +   +     +++   +  ++    A  +++L +  ERW+ELE
Sbjct: 600 QKAIGAQLEDGSIFAKDAQEGKRLSERYAAIDEELLLALERWDELE 645