Pairwise Alignments

Query, 640 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 648 a.a., ABC transporter ATP-binding protein from Burkholderia phytofirmans PsJN

 Score =  568 bits (1464), Expect = e-166
 Identities = 298/646 (46%), Positives = 421/646 (65%), Gaps = 9/646 (1%)

Query: 1   MSLVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEF 60
           MSL  I    LA+G+  LL +ADF++E GERV ++GRNGAGKSSLLKI++     D+G  
Sbjct: 1   MSLYTITGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAGKSSLLKIVADLSKPDDGLV 60

Query: 61  NIDGSVTVSRLQQDPPKAEQGTVYAYIAAGLKEVGEALEQYHQLSHDVAFAEPEQMER-- 118
                +T   + Q+P      TV+  +AAGL      L++Y  +++ +A  EPE  E   
Sbjct: 61  TRQQGLTSVYVPQEPEFDTDDTVFEAVAAGLTHARALLDEYDAVANQLA-DEPEGAEHDA 119

Query: 119 MLNQMQKLQETLDHHNGWQLDSRINQNCELLGLDPDKSLSELSGGWQRKVALARALVSAP 178
           ++++M  LQ +LDH + W   +R+    + +GL+ +  +  LSGG Q++VALARALV  P
Sbjct: 120 LMSRMNTLQSSLDHSDAWNWSTRVATTLQQIGLNGEARVGSLSGGMQKRVALARALVVQP 179

Query: 179 DLLLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWP 238
           D+LLLDEPTNHLD D I WLE  L+  +  ++FI+HDR F+ R+ATRIV+LDRG + S+P
Sbjct: 180 DVLLLDEPTNHLDFDGIRWLEDLLVSLRAGLLFITHDRAFLDRVATRIVELDRGRLLSYP 239

Query: 239 GNYQAYLDGKQEWLRVEAEKNALFDKRLADEEVWIRQGVKARRTRNEGRVRALKALRQER 298
           GN+ AY   K + L +E  + A FDK LA EEVWIR+GV+ARRTR+ GR+  L  +R ER
Sbjct: 240 GNFSAYQTRKAQQLEIEQVEAAKFDKLLAQEEVWIRKGVEARRTRSVGRIARLVEMRNER 299

Query: 299 SERLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPNG 358
           +ER N  GN K+ V   E+SGK+V ++ D+      + +V NF  TV+RGD+I  +GPNG
Sbjct: 300 AERRNVLGNVKLDVGQGEKSGKIVAELTDVTKRYGARTVVDNFTATVMRGDKIGFVGPNG 359

Query: 359 CGKSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQYREALDPEQTVEDNVGEGKKTITING 418
            GK+TL+K+++ +L P  G V++GT L++AYFDQ R  LD E+++ D +  G + + +NG
Sbjct: 360 AGKTTLLKMILGELAPDEGTVRIGTNLQVAYFDQMRAQLDLEKSLADTISPGSEWVEVNG 419

Query: 419 QDRHILSYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLDIET 478
           Q +H++SYL DFLF+P RAR+PVK+LSGGE+NRLLLA+L  RPAN+++LDEPTNDLDI T
Sbjct: 420 QKKHVMSYLGDFLFAPERARSPVKSLSGGERNRLLLARLFARPANVLVLDEPTNDLDIPT 479

Query: 479 LELLESLLTEYEGTLLLVSHDRAFIDNTVTSSWWYAGNGHWTEYVGGY------QDAIDQ 532
           LELLE LLTEY+GT+LLVSHDRAF+DN  TS     G G W EYVGG+      +D   Q
Sbjct: 480 LELLEELLTEYDGTVLLVSHDRAFLDNVATSVIASEGGGKWREYVGGFTDWQIQRDRSQQ 539

Query: 533 GAKFYSEEPSQTNTVEAPATAKTAEVKVAEPAKAAKKLSYKFQRELEAMPELMEKLEAEI 592
            A    +E  +    +A   A   +       + A KLS+K QRELEA+PE +  LEAE 
Sbjct: 540 MALDAQKEAGKDAGKDAGKDAAAKDSAAGRNTQRAAKLSFKEQRELEALPEKIAALEAEQ 599

Query: 593 LELQTTVASPDFYSQTQDKINQVLSLLADKEKQLEVCFERWEELES 638
             +   +     +++   +  ++    A  +++L +  ERW+ELE+
Sbjct: 600 KTIGAQLEDGSVFAKDAQEGTRLTERYAAIDEELLLALERWDELEN 645