Pairwise Alignments

Query, 711 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 489 a.a., putative N6-adenine-specific DNA methylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  220 bits (560), Expect = 1e-61
 Identities = 131/368 (35%), Positives = 194/368 (52%), Gaps = 7/368 (1%)

Query: 10  KGFEYSLAQELTEFGATEIKESVAGVYFTAPLTLAYRITLWTRLASRIVLVIYKGPCESA 69
           +G E  LA+ELT  GA +I+     V FT    + Y+     R A RI+  I     + A
Sbjct: 13  QGLEEILAEELTTLGANDIQIGRRMVSFTGDKRMMYKANFCLRTAIRILKPIKNFTAKDA 72

Query: 70  EQLYNAAYCIDWSAHFSNRNTFSIDFHGTGGFINNTQFGALKIKDAIVDRFRDDGDARPN 129
           +++YN    I W  +     TF+ID         +++F + K+KDAIVD FR     RP+
Sbjct: 73  DEVYNQIQAIPWEEYLDVNKTFAIDAVVFSEEFRHSKFVSYKVKDAIVDYFRKKTGKRPS 132

Query: 130 VARIDADIKVDAHFRNGVITIAMNFSGPSLHQRGYRSTTGEAPLKENLAANMLVRSGWKA 189
           V   + D+ ++ H      T++++ SG SLH+RGYR    +APL E LAA ML+ +GW+ 
Sbjct: 133 VRINNPDVLLNIHIAQTTCTLSLDSSGESLHRRGYRQEQVDAPLNEVLAAGMLLMTGWR- 191

Query: 190 APTTLLDPFCGSGTVLIEAALMAADIAPGLQRNRFGFEHWRRHDKATWHEIVEEAKARAS 249
               L+DP CGSGT+ IEAAL+A +IAPG+ R  F FE W   D   + EI  +      
Sbjct: 192 GECDLIDPMCGSGTIPIEAALIARNIAPGVFRKGFAFEKWVDFDSEMFDEIYNDDSQE-- 249

Query: 250 LGVKRCEVKFYGSDIDSRLVALAKRNAQNAGVLELIEFNVANALNVEPPAAEGYLITNPP 309
              +    K YG D + +   +A  N + AGV + +   +      E P  +  ++ NPP
Sbjct: 250 ---REFTHKIYGYDNNPKANEIATHNIKAAGVSKDVTLKLQPFQQFEQPQEKSIIVMNPP 306

Query: 310 YGERLGSVSELLQLYYQLGDKFKKEFGGWKVAMLCSDIELISALKLKADKQMKMFNGALE 369
           YGER+ S ++LL LY  +G++ K  F G +  +L    E    + LK  K++ +FNGALE
Sbjct: 307 YGERI-STNDLLGLYQMIGERLKHAFVGNEAWVLSYREECFDQIGLKPSKKVPLFNGALE 365

Query: 370 CAFNLYTL 377
           C F  Y +
Sbjct: 366 CEFRKYEI 373