Pairwise Alignments

Query, 690 a.a., ATP-dependent helicase DinG (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

 Score =  465 bits (1197), Expect = e-135
 Identities = 279/726 (38%), Positives = 405/726 (55%), Gaps = 50/726 (6%)

Query: 1   MLPDNVKNQIRAIYKDIAASLPNFRPRREQNFMVAEISKTLA-------GDYDKDRRIIV 53
           ML   +K+QI+  Y     +    + R  Q  M+AE++K L        G  + +  ++ 
Sbjct: 1   MLSTELKSQIQGAYTRFLEA-KGLKARYGQRLMIAEVAKVLGTIKTDAEGRRESEPAVVA 59

Query: 54  VEAGTGIGKSLSYILGTIPLALASKKKVCIATATVALQEQLLHKDLPFFLEQSGLNFRFG 113
           VEAGTG GK+++Y L  IP A A+ K++ IATATVALQEQ++HKDLP  +  SGLNF F 
Sbjct: 60  VEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFSFA 119

Query: 114 LVKGRQRYVCLSKLAMLIGDDNSTQMAM-------WQTKPDNSQIAMLQTLLNDVNEGRW 166
           L KGR RY+CLSKL +L+ +  +            ++ + D     +  +++  +   RW
Sbjct: 120 LAKGRGRYLCLSKLDLLLQEGQAQSATAQLFEEEGFRIEVDERSQKLFTSMIEKLAGNRW 179

Query: 167 NGEIDTLSTPIPDHLWQQIACDKHSCH-RQLASHRNCPFHKAREDVDTWDVLIANHSLLF 225
           +G+ D+    + D  W Q+  D   C  R   + + C F+KARE +   DV++ NH ++ 
Sbjct: 180 DGDRDSWPEELGDSDWSQLTTDHSQCTGRHCPNFQQCAFYKAREGMTKVDVIVTNHDMVL 239

Query: 226 ADLELGGGVILPNPEDVFYVIDEAHHLPIVARDFSSAQATLRGAADWLEKVGKTSAKLQN 285
           ADL LGGG +LP+P +  YV DE HHLP  A    +    LR  ADWL +V K   KL  
Sbjct: 240 ADLALGGGAVLPDPRETIYVFDEGHHLPDKAIGHFAHFTRLRSTADWLGQVEKNLTKLLA 299

Query: 286 QIKSNNIIAPAQAMQDHIGDLIGQLNQVAHYCDTQTKQFANPES----------RYRFEH 335
           Q   + +      + + I +L  +L     +  +  +Q A+ ++          R+RF  
Sbjct: 300 Q---HPLPGELGRLVEGIPELARELRTQQQFMFSACEQLADFKAGEDMEGRERPRHRFVG 356

Query: 336 GKLPGALKIPAENLAATSNLALKQFNKMQLL---LAEAIK---DGD----IPKHQAEALQ 385
           G +P       E+L        K F K+  L   +AE +K   DG+    I  HQAE   
Sbjct: 357 GVVP-------EHLVELGTELKKGFAKLTDLFTRIAELLKEDMDGETGSGIASHQAEEWY 409

Query: 386 AEMGFMLQRLENLQKLWKMMAKEDSNKGAPMARWIELITGKQV-DYLFSASPIEVGFMLE 444
              G +L R +   +LW     ED     PMARW+ L  G  + D   +ASPI     L 
Sbjct: 410 PLFGSLLTRSQGNWELWTAFTVEDPEDSPPMARWLTLAEGGALFDIEVNASPILAAETLR 469

Query: 445 TMLWQKAAGVVLCSATLRALNNFDHFAHQVGLSLKDGSRYLALQSPFDYPNNATLYLPKM 504
             LW  A G ++ SATL ALN+FD +  + GL    G+    + SPF + +   L +P +
Sbjct: 470 RNLWNVAFGALVTSATLTALNSFDRYRMRAGLP--KGAVTAVVPSPFHHADAGVLRVPDL 527

Query: 505 KTEPTDDA-YTAELAEQILQLIEGEMATLVLFASYWQMEKVAELLEGKLALEILIQGNAP 563
           K +P D A +TA +  ++  L+EG   TLVLF+S  QM+ V + LE      +LIQGN  
Sbjct: 528 KADPRDAAAHTAAIVRELPALVEGARGTLVLFSSRKQMQDVFDGLERDWRRRVLIQGNLS 587

Query: 564 RQQLLETHKAKCDKGEPSILFGTGSFSEGLDLPGDYLTNLIVTKLPFAVPTSPVEQAHAE 623
           +Q+ L  HKA+ D GE S+LFG  SF+EG+DLPG Y  ++++ K+PFAVP  PVE A AE
Sbjct: 588 KQETLNKHKARVDDGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVEAALAE 647

Query: 624 YVKIKGGNPFLQLTIPDASRKLIQSCGRLLRKEQDYGRVTILDRRLVTKRYGKSLLDALP 683
           ++  +GGNPF+++ +PDAS +L+Q+CGRLLR E D G +T+LDRR+VT+RYGK++L+ALP
Sbjct: 648 WIGARGGNPFMEIAVPDASLRLVQACGRLLRTETDRGTITLLDRRVVTQRYGKAILNALP 707

Query: 684 PFRRVI 689
           PFRR I
Sbjct: 708 PFRREI 713