Pairwise Alignments

Query, 292 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., ABC-type multidrug transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  154 bits (390), Expect = 2e-42
 Identities = 95/258 (36%), Positives = 151/258 (58%), Gaps = 5/258 (1%)

Query: 2   LTITDLTKTYDNGVRALDGVNLTISKG-MFGLLGPNGAGKSSLMRTIAALQSADSGSIVF 60
           L+I  LTKTY NG +AL G++L +++G  F LLGPNGAGKS+ +  ++ L +   G++  
Sbjct: 5   LSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKSGGTVNV 64

Query: 61  DGIDVLADPQSLRKTLGYLPQDFNVYPRISAYDLLDHLAVLKGINQSKQRKEIVEGLLAH 120
            G D+  DP  L++ LG +PQ+FN      A+D+L   A   GI  +K  KE  E  L  
Sbjct: 65  FGHDLDRDPSGLKRCLGVVPQEFNFNQFEKAFDILVTQAGYYGI-PAKIAKERAERYLNQ 123

Query: 121 TNLYQHKSKAVSGFSGGMRQRFGIAQALLGDPKLLIVDEPTAGLDPEERNRFHNLLVSLG 180
             L+  +  +    SGGM++R  IA+AL+  P+LLI+DEPTAG+D E R    + L  L 
Sbjct: 124 LGLWDKRDVSSRMLSGGMKRRLMIARALIHQPRLLILDEPTAGVDIELRRSMWSFLTELN 183

Query: 181 EEKV-VILSTHIVEDVSELCANMAVLASGKILLQGNPQQLVSELTEKIWTKTVDQAEAQQ 239
            E + +IL+TH +E+  +LC N+ ++  G+I+   + ++L+++L   + T  +D  E+Q 
Sbjct: 184 REGITIILTTHYLEEAEQLCRNIGIIDHGQIVKNTSMRELLTQL--HVETFLLDLKESQL 241

Query: 240 LENTLPVISKRLLAGRTV 257
           +   L     RL+   T+
Sbjct: 242 VAPELGNYPSRLVDHHTL 259