Pairwise Alignments

Query, 292 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 307 a.a., ABC-type multidrug transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  147 bits (372), Expect = 2e-40
 Identities = 77/222 (34%), Positives = 133/222 (59%), Gaps = 3/222 (1%)

Query: 1   MLTITDLTKTYDNGVRALDGVNLTISKG-MFGLLGPNGAGKSSLMRTIAALQSADSGSIV 59
           M+ I++LTK +     A+D ++  + +G + G LGPNGAGKS+ M+ +    +  SG+  
Sbjct: 1   MIEISNLTKRFAQHT-AVDDLSFQVQRGEVLGFLGPNGAGKSTTMKMLTGFLAPTSGTAS 59

Query: 60  FDGIDVLADPQSLRKTLGYLPQDFNVYPRISAYDLLDHLAVLKGINQSKQRKEIVEGLLA 119
             G D+       ++ +GYLP+    Y  ++    L+ +A ++G   + +R+  VE  +A
Sbjct: 60  ILGHDIQTQRLQAQRQIGYLPEGAPCYGDMTVRSFLEFIAEVRGFRGADKRQR-VEAAVA 118

Query: 120 HTNLYQHKSKAVSGFSGGMRQRFGIAQALLGDPKLLIVDEPTAGLDPEERNRFHNLLVSL 179
              L     +++   S G ++R G+AQA+L DPK+LI+DEPT GLDP ++++   L+  L
Sbjct: 119 QVELENVLGQSIETLSKGFKRRVGLAQAILHDPKVLILDEPTDGLDPNQKHQVRQLIQGL 178

Query: 180 GEEKVVILSTHIVEDVSELCANMAVLASGKILLQGNPQQLVS 221
            ++K+VI+STHI+E+VS +C    V+A G+++  G P +L S
Sbjct: 179 AQDKIVIISTHILEEVSAVCTRAVVIAHGRLVADGTPLELES 220