Pairwise Alignments

Query, 292 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 309 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  141 bits (355), Expect = 2e-38
 Identities = 77/228 (33%), Positives = 138/228 (60%), Gaps = 5/228 (2%)

Query: 1   MLTITDLTKTYDNGVRALDGVNLTISKG-MFGLLGPNGAGKSSLMRTIAALQSADSGSIV 59
           +L+I DL KTY+ G +AL GV+L I +G +  LLGPNGAGK++L+ T+  + +  SG + 
Sbjct: 4   ILSIRDLEKTYEGGFQALKGVSLDIEEGEILALLGPNGAGKTTLISTVCGITTPTSGHVS 63

Query: 60  FDGIDVLADPQSLRKTLGYLPQDFNVYPRISAYDLLDHLAVLKGINQSKQRKEIVEGLLA 119
             G D++ D ++ R  +G +PQ+ N+ P  + ++    +   +G+    +   ++E +L 
Sbjct: 64  VGGHDIIEDFRAARSLIGLVPQEINLEPFETVWN---SVRFSRGLFGKPRNDALLEEILR 120

Query: 120 HTNLYQHKSKAVSGFSGGMRQRFGIAQALLGDPKLLIVDEPTAGLDPEERNRFHNLLVSL 179
             +L+  +   +   SGGM++R  IA+AL  DP++L +DEPTAG+D E R    +++  L
Sbjct: 121 KLSLWDKRKSRIMELSGGMKRRVLIAKALSHDPRILFLDEPTAGVDVELRKDMWDVVAEL 180

Query: 180 GEEKV-VILSTHIVEDVSELCANMAVLASGKILLQGNPQQLVSELTEK 226
             + V +IL+TH +E+   +   + V+ +G+ILL     +L+++L +K
Sbjct: 181 KRDGVTIILTTHYIEEAEAIADRVGVITNGEILLVEEKARLMAQLGKK 228