Pairwise Alignments

Query, 292 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 318 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  137 bits (346), Expect = 2e-37
 Identities = 81/229 (35%), Positives = 137/229 (59%), Gaps = 7/229 (3%)

Query: 1   MLTITDLTKTYDNGVRALDGVNLTISKG-MFGLLGPNGAGKSSLMRTIAALQSADSGSIV 59
           ++TITDL K Y  G  AL+GV L+I +G +  LLGPNGAGK++L+ TI  L     G++ 
Sbjct: 8   IVTITDLVKAYPGGFTALNGVTLSIREGEILALLGPNGAGKTTLISTICGLTMPTGGTVT 67

Query: 60  FDGIDVLADPQSLRKTLGYLPQDFNVYPRISAYDLLDH-LAVLKGINQSKQRKEIVEGLL 118
             G DV+AD ++ R+ +G +PQ+ ++ P    ++ ++  +A  +G+    +    +E +L
Sbjct: 68  VGGHDVVADYRATRRMIGLVPQELSLEP----FETVEATVAFSRGLFGRPRDPARIEKIL 123

Query: 119 AHTNLYQHKSKAVSGFSGGMRQRFGIAQALLGDPKLLIVDEPTAGLDPEERNRFHNLLVS 178
              +L+  ++  +   SGGM++R  IA+AL  DPK+L +DEPTAG+D E R     ++ +
Sbjct: 124 RDLSLWDKRASKIVALSGGMKRRVLIAKALAHDPKVLFLDEPTAGVDVELRRDMWRVVEA 183

Query: 179 LGEEKV-VILSTHIVEDVSELCANMAVLASGKILLQGNPQQLVSELTEK 226
           L    V +IL+TH +E+   +   +AV+  G+ILL      L++ + +K
Sbjct: 184 LKAAGVTIILTTHYIEEAEAIADRIAVINKGEILLVEETAGLMARMGKK 232