Pairwise Alignments

Query, 292 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 503 a.a., ATP-binding transport protein natA (Na+ ABC transporter) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  211 bits (537), Expect = 3e-59
 Identities = 112/271 (41%), Positives = 167/271 (61%), Gaps = 3/271 (1%)

Query: 16  RALDGVNLTISKGMFGLLGPNGAGKSSLMRTIAALQSADSGSIVFDGIDVLADPQSLRKT 75
           +AL GV+  I  GMFGLLGPNGAGKS+LMR I  +     GSI  +G+D     + L+  
Sbjct: 230 KALRGVSFEIQTGMFGLLGPNGAGKSTLMRVICGIFEQSYGSIWINGLDTRIYREELQSL 289

Query: 76  LGYLPQDFNVYPRISAYDLLDHLAVLKGINQSKQRKEIVEGLLAHTNLYQHKSKAVSGFS 135
           +G+LPQ+F  Y  +++++ LD+ A+LKGI     R+E ++ +L   ++Y+ K + +  FS
Sbjct: 290 IGFLPQEFGTYENMTSWEFLDYQAILKGIVDGDLRRERLDYVLKAVHMYERKDEKIGSFS 349

Query: 136 GGMRQRFGIAQALLGDPKLLIVDEPTAGLDPEERNRFHNLLVSLGEEKVVILSTHIVEDV 195
           GGM+QR GIA  LL  P++L+VDEPTAGLDP ER RF NLLV L ++++VI STHI+ED+
Sbjct: 350 GGMKQRIGIALILLHLPRILVVDEPTAGLDPRERIRFRNLLVELSKDRIVIFSTHIIEDI 409

Query: 196 SELCANMAVLASGKILLQGNPQQLVSELTEKIWTKTVDQAEAQQLENTLPVISKRLLAGR 255
           S  C  + V+  G++   G+P  +V     K+W   +D+ E +++ +   VI   +  G 
Sbjct: 410 SSSCNQVVVINKGELKYFGDPSDMVEMANGKVWQFNIDKTEFEKVLDKSLVI-HHIQEGD 468

Query: 256 TV-LNVMAETCP-EGFTPAAAGLEDLYFSTL 284
           T+ +  ++   P EG     A LED Y   L
Sbjct: 469 TIRVRYLSVGQPYEGAVEVEANLEDAYLCLL 499