Pairwise Alignments

Query, 292 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  222 bits (565), Expect = 9e-63
 Identities = 113/248 (45%), Positives = 156/248 (62%), Gaps = 1/248 (0%)

Query: 2   LTITDLTKTYDNGVRALDGVNLTISKGMFGLLGPNGAGKSSLMRTIAALQSADSGSIVFD 61
           + I +L K Y NG  AL  VNL I  GMFGLLGPNGAGKS+LMR + AL    SG +   
Sbjct: 3   IIIKNLNKIYPNGNHALKDVNLEIPAGMFGLLGPNGAGKSTLMRILVALMEPTSGQVEIC 62

Query: 62  GIDVLADPQSLRKTLGYLPQDFNVYPRISAYDLLDHLAVLKGINQSKQRKEIVEGLLAHT 121
           G D++   + +R  LGYLPQDF  + +   Y+ LD+ A L G+  S+QRK+ V+ +L + 
Sbjct: 63  GYDLMKQRKEIRGILGYLPQDFRFFAKYKTYEFLDYAARLSGMTHSRQRKQAVDEMLENV 122

Query: 122 NLYQHKSKAVSGFSGGMRQRFGIAQALLGDPKLLIVDEPTAGLDPEERNRFHNLLVSLGE 181
            L+  + +  +  SGGM++R GIAQAL+  PK++IVDEPT GLDPEER RF NLL  + E
Sbjct: 123 GLFDVRERYANKLSGGMKRRLGIAQALIHHPKVIIVDEPTTGLDPEERIRFRNLLSEVSE 182

Query: 182 EKV-VILSTHIVEDVSELCANMAVLASGKILLQGNPQQLVSELTEKIWTKTVDQAEAQQL 240
             V +ILSTHIV D+S  C NMA++  G++   G+PQ ++     K+W       +  ++
Sbjct: 183 NDVTIILSTHIVGDISSTCNNMALMNRGQVSFNGSPQDMLKLAEGKVWRIRAAGDQLHEI 242

Query: 241 ENTLPVIS 248
           +   PVIS
Sbjct: 243 DKKYPVIS 250