Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 549 a.a., acyl-CoA synthetase from Sinorhizobium meliloti 1021

 Score = 78.2 bits (191), Expect = 9e-19
 Identities = 123/532 (23%), Positives = 212/532 (39%), Gaps = 81/532 (15%)

Query: 23  GRDNPTKPKDANICRHLKLAAHHIPHHLAVAVQQGKGKSFANLTYQELDFISLNKQSDAI 82
           G   P   +  N+   L  AA   P  +A+     + +           +  +  + DA+
Sbjct: 8   GGVTPVSTRVMNLANFLSQAARRNPDEIALVHGDRRWR-----------WSEMEARVDAM 56

Query: 83  AFAL-NAYGLTRGMKAVLMVTPSLDFFALTFALFKAGIIPVLVDPGMGIKNLKQCFIEAA 141
           A+AL + +G+ +G + ++        F   FA F+AG + V                   
Sbjct: 57  AYALVHEFGVRKGDRILVHSANCNQMFESMFAAFRAGAVWV------------------- 97

Query: 142 PDAFIGIPKAHIARRLLGWGKASVKRLINVDANQSGVTDTLSRLLTGAPSLASMLSFTTK 201
           P  F  +P+  +A      G   V      +A+         ++ +  P  +S +     
Sbjct: 98  PTNFRQLPE-EVAYLAESSGARLVIFQAAFEAHAEACRAAGEQIGSCIPIGSSRVGEDYD 156

Query: 202 SSSAKLPEQVEYPMALLEHDEMAAILFTSGSTGTPKGVVYSHGMFEAQIQALKQDY--GI 259
           +  A+   +   P+A+ + D+     +TSG+TG PK  V +HG     I     D     
Sbjct: 157 AIVARNLGRSVSPVAV-DRDDPCWYFYTSGTTGRPKAAVLTHGQMAFVINNHIGDLFPAT 215

Query: 260 AHGERDLATFPL------FSLFGPALGMTSIVPEMDASKPITANPEFLFAAIEKYQCSNI 313
            H +R +   PL        L   A G T+I+   +        P+F +A +EK++ +N+
Sbjct: 216 THRDRSIVVAPLSHGAGIHQLCQVARGATTILLPSEK----LDIPQF-WALVEKWRVNNL 270

Query: 314 FVNPALLERLGRAGEQTDSKNQHKLSSVKRVISAGAPATIASIARFSKMLSDGVPVLNSY 373
           F  P +++ L     +  S +++  SS++ VI AGAP   A   +  + L  G  ++  +
Sbjct: 271 FAVPTIVKLL----IEDPSVDRYDHSSLRYVIYAGAPMYRADQKKALEKL--GAVLVQYF 324

Query: 374 GATESLPISMIASDELFTTTQVTDNGGGICVGRAIDGVKIEIIAITEADIPEWDNRLCLN 433
           G  E      +      ++    D   G C G    G++++I      ++P         
Sbjct: 325 GLGEVTGAITVLPPAFHSSEDGPDARIGTC-GFERTGMQLQIQDEDGNEVP--------- 374

Query: 434 AGEIGEIVVTGQMVSQSYYHREKATAASKIWDSERQTFRH---RMGDLGYLDDSGRLWMC 490
           AG  GEI V G  V   YY   +A A         + FR+   R GDLG++D  G L++ 
Sbjct: 375 AGATGEICVIGPAVFAGYYRNPEANA---------KAFRNGWFRTGDLGHVDAQGFLYIT 425

Query: 491 GRKAHRVDATQGGQFAKRYYSIPCERIFNTHPNVKRSALVGV--TVKGQHGV 540
           GR +       GG      Y    E     HP++  +A+VGV   V G+ G+
Sbjct: 426 GRASDMY--ISGG---SNVYPREIEEKLLMHPDISEAAIVGVPDPVWGEVGI 472