Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 574 a.a., acyl-CoA synthetase (RefSeq) from Shewanella loihica PV-4

 Score = 75.1 bits (183), Expect = 8e-18
 Identities = 122/508 (24%), Positives = 199/508 (39%), Gaps = 64/508 (12%)

Query: 40  KLAAHHIPHHLAVAVQQGKGKSFANLTYQELDFISLNKQSDAIAFALNAYGLTRGMKAVL 99
           ++AA H P  LA+ V   +G  ++   YQ           D +A  L A G+  G +  +
Sbjct: 39  QMAASH-PDQLAI-VMHHQGIRWSYQEYQS--------HIDELAAGLLAIGIKPGDRVGI 88

Query: 100 MVTPSLDFFALTFALFKAGIIPVLVDPGMGIKNLKQCFIEAAPDAFIGIPKAHIARRL-- 157
               ++++    FA  K G I V ++P    + L+         A I   K   +  L  
Sbjct: 89  WSPNNIEWCLTQFATAKIGAIMVCINPAYRPEELQYALNNVGCRAIICAEKFKSSHYLSM 148

Query: 158 LGWGKASVKRLINVDANQSGVTDTLSRLLTGAPSLASMLSFT------TKSSSAKLPEQV 211
           L      +K+ +      + +      +  G  +   ML+F       T+S    L +  
Sbjct: 149 LYELAPELKQCLPGQLESANLPSLEFVIRMGDEASPGMLNFNHLKRPLTESDRKALKDTA 208

Query: 212 EYPMALLEHDEMAAILFTSGSTGTPKGVVYSHGMFEAQIQALKQDYGIAHGERDLATFPL 271
               A L   +   I FTSG+TG+PKG   SH         + +   +   +R     PL
Sbjct: 209 ----AQLSPFDAINIQFTSGTTGSPKGATLSHHNILNNGLLVAKAMRLGLEDRLCIPVPL 264

Query: 272 FSLFGPALGMTSIVP-------EMDASKPITANPEFLFAAIEKYQCSNIFVNPALLERLG 324
           +  FG  LG  S +          D+  P+T         +E  +C+ +   P +     
Sbjct: 265 YHCFGMVLGNLSCISVGASAIYPSDSFDPLTT-----LEVVEAERCTALHGVPTMF---- 315

Query: 325 RAGEQTDSKNQHKLSSVKRVISAGAPATIASIARFSKMLSDGVPVLNSYGATESLPISMI 384
            A  +     +  LSS++  + AGA      + R  + L     VL  YG TE  PI+ +
Sbjct: 316 IAQLEHPEFKRFDLSSLRTGVMAGATCP-EEVMRRVQDLMYMKEVLIGYGQTECSPINNM 374

Query: 385 ASDELFTTTQVTDNGGGICVGRAIDGVKIEIIAITEADIPEWDNRLCLNAGEIGEIVVTG 444
                    +VT       VGRA+   +++I+      +P          G+ GE+   G
Sbjct: 375 TEIGSSLEKRVT------TVGRALAHTQVKIVDEFGEVLP---------VGQPGEVCSRG 419

Query: 445 QMVSQSYYHREKATAASKIWDSERQTFRHRMGDLGYLDDSGRLWMCGRKAHRVDATQGGQ 504
             V Q Y++  + TAA+   DSE        GDLG +D  G + + GR    +   +GG+
Sbjct: 420 YCVMQFYWNDAEKTAAT--IDSEGWL---HSGDLGEMDSEGYVKIVGRIKDMI--IRGGE 472

Query: 505 FAKRYYSIPCERIFNTHPNVKRSALVGV 532
                Y    E    THP+V+ +A+ GV
Sbjct: 473 ---NIYPREIEEKLYTHPDVQDAAIFGV 497