Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 563 a.a., peptide synthase (RefSeq) from Shewanella loihica PV-4

 Score =  736 bits (1900), Expect = 0.0
 Identities = 386/581 (66%), Positives = 446/581 (76%), Gaps = 27/581 (4%)

Query: 33  ANICRHLKLAAHHIPHHLAVAVQQGKGKSFANLTYQELDFISLNKQSDAIAFALNAYGLT 92
           AN+CRHL  AA   P+ LAVAVQ+  G     L YQEL+F  L+  SD +A  L AYG+ 
Sbjct: 9   ANLCRHLNRAAKEAPNELAVAVQKACGVLNKQLEYQELNFAKLDAMSDILAHGLYAYGIK 68

Query: 93  RGMKAVLMVTPSLDFFALTFALFKAGIIPVLVDPGMGIKNLKQCFIEAAPDAFIGIPKAH 152
           RG KAVLMVTPSL+FFALTFALFKAGI+P+LVDPGMG+KNLKQCF EA PDAFIGIPKAH
Sbjct: 69  RGAKAVLMVTPSLEFFALTFALFKAGIVPILVDPGMGVKNLKQCFQEAEPDAFIGIPKAH 128

Query: 153 IARRLLGWGKASVKRLINVDANQSGVTDTLSRLLTGAPSLASMLSFTTKSSSAKLPEQVE 212
           +ARRL GWGK+S+  L+ V  ++          L G  SL  +          K P    
Sbjct: 129 LARRLFGWGKSSLTHLVTVGGSK----------LWGGASLEQLKQL----GQGKGP---- 170

Query: 213 YPMALLEHDEMAAILFTSGSTGTPKGVVYSHGMFEAQIQALKQDYGIAHGERDLATFPLF 272
           + MA L+ DEM AILFTSGSTGTPKGVVYSH MFEAQI ALK DY IA GERDLATFPLF
Sbjct: 171 FSMAQLDCDEMCAILFTSGSTGTPKGVVYSHRMFEAQISALKHDYQIAPGERDLATFPLF 230

Query: 273 SLFGPALGMTSIVPEMDASKPITANPEFLFAAIEKYQCSNIFVNPALLERLGRAGEQTDS 332
           SLFGPALGM SIVP+MDASKPITANP+++FAAIE+Y C+N+FVNPAL+ERLG+AG   D 
Sbjct: 231 SLFGPALGMASIVPDMDASKPITANPDYIFAAIERYACTNMFVNPALIERLGQAGTSRDQ 290

Query: 333 KNQHKLSSVKRVISAGAPATIASIARFSKMLSDGVPVLNSYGATESLPISMIASDELFTT 392
           K   KL S+KRVISAGAPATIASI RFS+ML+   PVLNSYGATESLP+SMI S ELF T
Sbjct: 291 K--VKLGSLKRVISAGAPATIASIKRFSEMLTSDAPVLNSYGATESLPLSMITSHELFDT 348

Query: 393 TQVTDNGGGICVGRAIDGVKIEIIAITEADIPEWDNRLCLNAGEIGEIVVTGQMVSQSYY 452
           T+VTDNGGGICVG+ IDGV + II I EA+IP W   LCL   +IGEIVV G MVS SYY
Sbjct: 349 TEVTDNGGGICVGKPIDGVSMHIIDIDEAEIPTWSADLCLPREQIGEIVVQGPMVSASYY 408

Query: 453 HREKATAASKIWDSERQTFRHRMGDLGYLDDSGRLWMCGRKAHRVDATQGGQFAKRYYSI 512
            R+KATA +KI+D + Q + HRMGDLGYLD+ GRLWMCGRKAHRVD    GQ  +RY+SI
Sbjct: 409 RRDKATAQAKIFDDQGQHY-HRMGDLGYLDNQGRLWMCGRKAHRVDCRVDGQ-PRRYFSI 466

Query: 513 PCERIFNTHPNVKRSALVGVTVKGQHGVGEIKPLICIELDQSLVCNKSAQLYQELMVIAE 572
           PCERI+NTH ++KRSALVG+ VK     GE++PLIC+EL+Q L C+ +A LY EL ++ E
Sbjct: 467 PCERIYNTHSDIKRSALVGIKVK-----GEMQPLICLELEQGLSCSNAAALYTELRLLGE 521

Query: 573 QYSQTQGIRRFLIHPDFPVDVRHNAKIFREKLAVWAQSQTK 613
            +SQTQGI RFLIHP FPVD+RHNAKIFREKLAVWAQS  K
Sbjct: 522 AHSQTQGITRFLIHPGFPVDIRHNAKIFREKLAVWAQSTYK 562