Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 503 a.a., Probable chain-fatty-acid-CoA ligase FadD13 (fatty-acyl-CoA synthetase) from Mycobacterium tuberculosis H37Rv

 Score = 79.0 bits (193), Expect = 5e-19
 Identities = 111/474 (23%), Positives = 192/474 (40%), Gaps = 82/474 (17%)

Query: 70  LDFISLNKQSDAIAFALNAYGLTRGMKAVLMVTPSLDFFALTFALFKAGIIPVLVDPGMG 129
           + +  +N  ++  A  L A G+ +G +  L++  S++F  L +   K G + V ++  + 
Sbjct: 30  MTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRL- 88

Query: 130 IKNLKQCFIEAAPDAFIGIPKAHIARRLLGWGKASVKRLINVDANQSG-VTDTLSRLLTG 188
                     AAP+    +  +     + G   A V   I   A+  G VTD +     G
Sbjct: 89  ----------AAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWI-----G 133

Query: 189 APSLASMLSFTTKSSSAKLPEQVEYPMALLEHDEMAAILFTSGSTGTPKGVVYSHGMFEA 248
           A SLA  L    +S++A      + P      D+   I++TSG+TG PKGVV++H    +
Sbjct: 134 ADSLAERL----RSAAA------DEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHS 183

Query: 249 QIQALKQDYGIAHGERDLATFPLFS-------LFGPALGMTSI-VPEMDASKPITANPEF 300
              +      + + +R L   P+F        +F    G+T I +P+ DA+K  +     
Sbjct: 184 AASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFSAMRGVTLISMPQFDATKVWS----- 238

Query: 301 LFAAIEKYQCSNIFVNPALLERLGRAGEQTDSKNQHKLSSVKRVISAGAPATIASIARFS 360
               +E+  C    V PA+L  + +  E  +          +  I+ GAP   A I  ++
Sbjct: 239 --LIVEERVCIGGAV-PAILNFMRQVPEFAEL----DAPDFRYFITGGAPMPEALIKIYA 291

Query: 361 KMLSDGVPVLNSYGATESLPISMIASDELFTTTQVTDNGGGICVGRAIDGVKIEIIAITE 420
              +  + V+  Y  TES          L  +       G    GRA     + +     
Sbjct: 292 ---AKNIEVVQGYALTES-----CGGGTLLLSEDALRKAGS--AGRATMFTDVAV----- 336

Query: 421 ADIPEWDNRLCLNAGEIGEIVVTGQMVSQSYYHREKAT--AASKIWDSERQTFRHRMGDL 478
                 D+ +    GE GE+V+   ++ + Y++R +AT  A    W         R GD+
Sbjct: 337 ----RGDDGVIREHGE-GEVVIKSDILLKEYWNRPEATRDAFDNGW--------FRTGDI 383

Query: 479 GYLDDSGRLWMCGRKAHRVDATQGGQFAKRYYSIPCERIFNTHPNVKRSALVGV 532
           G +DD G L++  R    +    GG+     Y    E +    P V   A++G+
Sbjct: 384 GEIDDEGYLYIKDRLKDMI--ISGGE---NVYPAEIESVIIGVPGVSEVAVIGL 432