Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 556 a.a., acyl-CoA synthetase from Herbaspirillum seropedicae SmR1

 Score = 89.7 bits (221), Expect = 3e-22
 Identities = 125/519 (24%), Positives = 208/519 (40%), Gaps = 81/519 (15%)

Query: 31  KDANICRHLKLAAHHIPHHLAVAVQQGKGKSFANLTYQELDFISLNKQSDAIAFALNAYG 90
           K  N+ R L   A   P    + + QG       L    + +  +N + DA+A AL   G
Sbjct: 28  KVMNLGRLLSDVARRFPDEPGLILAQGAADGSDRL----IPWREINARVDALAHALTRRG 83

Query: 91  LTRGMKAVLMVTPSLDFFALTFALFKAGIIPVLVDPGMGIKNLKQCFIEAAPDAFIGIPK 150
           + +G K ++    +   F   +A FK G+  V V     I   +  ++  +  A + +  
Sbjct: 84  VKKGDKMLVHSRNNQQIFESAWAAFKMGV--VWVPTNFRITPPEAAYLGQSSGACVMLYD 141

Query: 151 AHIARRLLGWGKASVKRLINVDANQSGVTDTLSRLLTGAPSLASMLSFTT---KSSSAKL 207
              A+               VDA ++  +  L  ++  A + A  L +     + S A  
Sbjct: 142 RGFAQY--------------VDAVKAA-SPALEHVVALADARAGELDYEALVREGSGAAF 186

Query: 208 PEQVEYPMALLEHDEMAAILFTSGSTGTPKGVVYSHGMFEAQIQALKQDY--GIAHGERD 265
            E      A +++D+     +TSG+TG PK  + SHG     +     D   G+ H  R 
Sbjct: 187 RE------AEVDYDDPLWFFYTSGTTGHPKAGMLSHGQMAFVVTNHLADLMPGLTHQSRS 240

Query: 266 LATFPLFSLFGPALGMTSIVPEMDASKPITANPEFL-----FAAIEKYQCSNIFVNPALL 320
           L   PL        G+ +++     +  I  + E L     +  +EKY+  N+F  P ++
Sbjct: 241 LVVAPL----SHGAGVHAVINTARGAASILLSSERLVVEEAWQLVEKYRVDNLFTVPTIV 296

Query: 321 ERLGRAGEQTDSKNQHKLSSVKRVISAGAPA----TIASIARFSKMLSDGVPVLNSYGAT 376
           + L     + +S +++  SS+K VI AGAP      + ++ +  K+L     +    G  
Sbjct: 297 KIL----VEDESVDRYDHSSLKHVIYAGAPMYRADQVYALKKLGKVLVQYYGLGEVTGNI 352

Query: 377 ESLPISMIASDELFTTTQVTDNGGGICVGRAIDGVKIEIIAITEADIPEWDNRLCLNAGE 436
             LP  +   D+     +V     G C G    G++I I+          D+   L   E
Sbjct: 353 TFLPPYLHFEDDAHPQARV-----GTC-GMPRTGMQIAILN---------DDGQELAPFE 397

Query: 437 IGEIVVTGQMVSQSYYHREKATAASKIWDSERQTFRH---RMGDLGYLDDSGRLWMCGRK 493
            GEI V G  V   Y++  +A A         + F+H     GDLG++D  G L++ GR 
Sbjct: 398 TGEICVRGPAVFMGYHNNPEANA---------KAFKHDWFHTGDLGHVDQDGFLYITGRS 448

Query: 494 AHRVDATQGGQFAKRYYSIPCERIFNTHPNVKRSALVGV 532
           +       GG      Y    E    THP V   A++GV
Sbjct: 449 SDMY--ISGG---SNVYPREIEEALLTHPAVSEVAVLGV 482