Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 528 a.a., AMP-binding protein from Ralstonia sp. UNC404CL21Col

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 117/493 (23%), Positives = 194/493 (39%), Gaps = 85/493 (17%)

Query: 75  LNKQSDAIAFALNAYGLTRGMKAVLMVTPSLDFFALTFALFKAGIIPVLVDPGMGIKNLK 134
           LN  S+  A AL A GL  G K  ++   S  F    + + KAG++ V ++  +G ++++
Sbjct: 49  LNADSNRYAHALLASGLRPGDKVAMVCGNSAQFLVAAYGILKAGLVWVPINAMLGPEDVR 108

Query: 135 QCFIEAAPDAFIGIPKAHIARRLLGWGKASVKRLINVDANQSGVTDTLSRLLTGAPSLAS 194
                A                         + ++   A    + DTL+ L  G P+   
Sbjct: 109 YILEHA-----------------------EARHVVIDAALYPTLRDTLAAL--GLPAHQC 143

Query: 195 MLSFTTKSSSAKLPEQVEY---------PMALLEHDEMAAILFTSGSTGTPKGVVYSHGM 245
                     A  P+ VE          P  +++  ++A I++TSG+TG PKG ++SH  
Sbjct: 144 F-----GEPVADGPQTVEQALQGHADTLPAVVIDDRDLALIMYTSGTTGRPKGAMHSHRS 198

Query: 246 FEAQIQALKQDYGIAHGERDLATFPLFSLFGPALGMTSIVPEMDASKPITANPEFLFAAI 305
             A + +      +   +      P+F     A   ++++           +P  L  AI
Sbjct: 199 VHAALMSNVAGLNLNETDVFSCLLPMFHCAQFATAASAMMVGATLVIQRGFDPAALLDAI 258

Query: 306 EKYQCSNIFVNP----ALLERLGRAGEQTDSKNQHKLSSVKRVISAGAPATIASIARFSK 361
              + + +F  P    ALL    RA        Q  LSS++  + A AP     + R   
Sbjct: 259 ANERITQLFGLPLMYAALLHHPLRA--------QRDLSSLRLCLYAMAPMAKPLLER--- 307

Query: 362 MLSDGVP--VLNSYGATESLPISMIASDELFTTTQVTDNGGGICVGRAIDGVKIEIIAIT 419
           ++++  P   L S G TE  P++M  + +     Q T N  G            +   + 
Sbjct: 308 LIAEVCPNFALGS-GQTEIFPMTMYFAPD--QQLQRTGNYWG------------QPCMVN 352

Query: 420 EADIPEWDNRLCLNAGEIGEIVVTGQMVSQSYYHREKATAASKIWDSERQTFRHRMGDLG 479
           EA + + D    L   ++GEIV  G  V   YY   +ATA      + R+   H  GDLG
Sbjct: 353 EAAVMD-DQGNLLGPNQLGEIVHRGPNVMLGYYKDPQATA------NARRFGWHHTGDLG 405

Query: 480 YLDDSGRLWMCGRKAHRVDATQGGQFAKRYYSIPCERIFNTHPNVKRSALVGVTVKGQHG 539
             D  G+L    R    +    GG+      S+  E +   HP V  +A+VG  +   H 
Sbjct: 406 MWDADGQLQFKDRIKDMIKT--GGE---NVPSVKVEEVLLRHPAVANAAVVG--LPHAHW 458

Query: 540 VGEIKPLICIELD 552
           V  +   +C++ D
Sbjct: 459 VEAVAAFVCLKPD 471