Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 520 a.a., Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II from Paraburkholderia bryophila 376MFSha3.1

 Score = 85.9 bits (211), Expect = 4e-21
 Identities = 124/511 (24%), Positives = 205/511 (40%), Gaps = 88/511 (17%)

Query: 41  LAAHHIPHHLAVAVQQGKGKSFANLTYQELDFISLNKQSDAIAFALNAYGLTRGMKAVLM 100
           LAA   P H+A+ ++ G+  + A L           +  +A A  L  +G+  G + +++
Sbjct: 30  LAAGRDPQHVAL-IEDGRRLTNAQLV----------QAVEATAALLRDWGVRGGDRVMIV 78

Query: 101 VTPSLDFFALTFALFKAGIIPVLVDPGMGIKNLKQCFIEAAPDAFIGIPKAHIARRLLGW 160
              S+    L FA  +     ++ +  +    L         DA     +AH   R+  +
Sbjct: 79  AENSIAQIVLLFATARLDAWALVSNARLSASEL---------DAI----RAHAQPRVTAY 125

Query: 161 GKASVKRLINVDANQSGVTDTLSRLLTGAPSLASMLSFTTKSSSAKLPEQVEYPMALLEH 220
              S     + DA Q       S     AP + +  SFT  + +     Q E P+     
Sbjct: 126 VVES-----SADAGQHAQRHGASAAPDVAPGIGAW-SFTVDTFA-----QAE-PVEAAND 173

Query: 221 DEMAAILFTSGSTGTPKGVVYSHG--MFEAQIQA-LKQDYGIAHGERDLATFPLFSLFGP 277
            + AA+++T+G+TG PKGV+ SH   +F A + + L+Q   +   +   A  P+  ++G 
Sbjct: 174 RQCAALIYTTGTTGAPKGVMLSHRNLLFIAAVSSRLRQ---VRPDDVVYAVLPISHVYGF 230

Query: 278 ALGMTSIVPEMDASKPITANPEFLFAAIEKYQCS---NIF-----VNPALLERLGRAGEQ 329
           A   +  +  + A   +   P F   A+ +       +IF     ++  L+E L     Q
Sbjct: 231 A---SVCLGSLYAGATLRLAPRFAPGAVRRALADERVSIFQGVPAMHAKLIEHL-----Q 282

Query: 330 TDSKNQHKLSSVKRVISAGAPATIASIARFSKMLSDGVPVLNSYGATESLPISMIASDEL 389
           T     H    ++ + S G+P   A  A    +   G+P+ N YG TES P         
Sbjct: 283 THGHAWH-APHLRFIYSGGSPLDAALKAHVESVY--GLPLHNGYGMTESSP--------T 331

Query: 390 FTTTQVTDNGGGICVGRAIDGVKIEIIAITEADIPEWDNRLCLNAGEIGEIVVTGQMVSQ 449
            + T +        VG  I GV++  + +  AD+           GE GE+ V G  V  
Sbjct: 332 VSQTMLDAPRRDCSVGEVIPGVEVRFVGLDGADVA---------VGETGELWVRGPNVML 382

Query: 450 SYYHREKATAASKIWDSERQTFRHRMGDLGYLDDSGRLWMCGRKAHRVDATQGGQFAKRY 509
            YY   + T A+   D   +T     GDL   D  G L + GR    +  +         
Sbjct: 383 GYYRNPQQTRAAVTQDGWLKT-----GDLARQDADGALHIVGRSKDLIIRS-----GFNV 432

Query: 510 YSIPCERIFNTHPNVKRSALVGVTVKGQHGV 540
           Y    E + N HP V +SA++G  V+G   V
Sbjct: 433 YPAEVEHVLNAHPQVVQSAVIGRPVEGNEEV 463