Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 553 a.a., long-chain fatty acid--CoA ligase from Burkholderia phytofirmans PsJN

 Score = 85.1 bits (209), Expect = 7e-21
 Identities = 90/319 (28%), Positives = 144/319 (45%), Gaps = 46/319 (14%)

Query: 221 DEMAAILFTSGSTGTPKGVVYSHGMFEAQIQALKQDYGIAHGERDLATFPLFSLFGPALG 280
           D++A +++TSG+TGTPKGV+ +H    A  + +  ++ +A  +R LA+ PL+ + G  L 
Sbjct: 206 DDVALLMYTSGTTGTPKGVLLTHRNLVANARNISAEHRLASDDRVLASLPLYHING--LV 263

Query: 281 MTSIVPEMDASKPITA---NPEFLFAAIEKYQCSNIFVNPALLERLGRAGEQTDSKNQHK 337
           +T + P       +     +    +  +  + C+ I V P ++  L  A    D    + 
Sbjct: 264 VTLLAPLFHGGSAVMTSRFSARTFWRDVALHACTWINVVPTIVAYLLNA----DEACTYD 319

Query: 338 LSSVK--RVISAGAPAT--IASIARFSKMLSDGVPVLNSYGATESLPISMIASDELFTTT 393
           LS++K  R  SA  PA    A  ARF      G+ V+ + G TE+       +  +F+  
Sbjct: 320 LSALKFCRSASAALPADHHRAFEARF------GIGVIETMGMTET-------AAPVFSNP 366

Query: 394 QVTDNGGGICVGRAIDGVKIEIIAITEADIPEWDNRLCLNAGEIGEIVVTGQMVSQSYYH 453
              +      +G    G         EA + + + R C  A E GE+V+ G+ V   YY 
Sbjct: 367 YEMERRRVGSIGLPSGG---------EAKVIDREGRECA-ANECGELVLRGEQVMGGYYK 416

Query: 454 REKATAASKIWDSERQTFRHRMGDLGYLDDSGRLWMCGRKAHRVDATQGGQFAKRYYSIP 513
           R + TAA+   D   +T     GDLGY D  G  ++ GR A  +    G   A R     
Sbjct: 417 RPEETAAAFTSDGWLRT-----GDLGYRDADGYFYINGR-AKELIIKGGENIAPR----E 466

Query: 514 CERIFNTHPNVKRSALVGV 532
            +     HP+V  +A VGV
Sbjct: 467 IDEALLRHPDVLDAAAVGV 485