Pairwise Alignments
Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 3230 a.a., cytochrome C551 peroxidase from Burkholderia phytofirmans PsJN
Score = 75.1 bits (183), Expect = 4e-17
Identities = 115/488 (23%), Positives = 180/488 (36%), Gaps = 86/488 (17%)
Query: 24 RDNPTKPKDANICRHLKLAAHHIPHHLAVAVQQGKGKSFANLTYQELDFISLNKQSDAIA 83
R +P N+ A P +A+A + LTY E+D SD IA
Sbjct: 1068 RGREFQPAADNVLALFARHARKTPDRVALADAE------TQLTYAEVD-----AASDRIA 1116
Query: 84 FALNAYGLTRGMKAVLMVTPSLDFFALTFALFKAGIIPVLVDPGMGIKNLKQCFIEAAPD 143
FAL G+ + + S+ F + K+G V +DP AAP
Sbjct: 1117 FALRQRGVGAEQPVAVCIERSVRFAVALIGVMKSGAYVVPLDP-------------AAP- 1162
Query: 144 AFIGIPKAHIARRLLGWGKASVKRLINVDANQSGVTDTLSRLLTGAPSLASMLSFTTKSS 203
RL +A R I + ANQ T + GA S + T SS
Sbjct: 1163 ----------RERLTASVEACGARWI-LTANQ-----TQAMAAVGAASTLDFDALTQASS 1206
Query: 204 SAKLPEQVEYPMALLEHDEMAAILFTSGSTGTPKGVVYSHGMFEAQIQALKQDYGIAHGE 263
A + E P L + + A ++FTSGSTGTPKGVV SHG ++ + + A
Sbjct: 1207 PASVEEATASPATPLAN-QAAYLIFTSGSTGTPKGVVISHGALADYVEGMLDELAFAAD- 1264
Query: 264 RDLATFPLFSLFGPALGMTSIVPEMDASKPI-------TANPEFLFAAIEKYQCSNIFVN 316
A+ + S LG T++ + + + + +P+ + + +
Sbjct: 1265 ---ASMAMVSTVAADLGHTTLFGALCSGRTLHLLPAQCAFDPDRFAHEMRTRNVGILKIV 1321
Query: 317 PALLERLGRAGEQTDSKNQHKLSSVKRVISAGAPATIASIARFSKMLSDGVPVLNSYGAT 376
P+ L L A D H L + G + + R + L+ V+N YG T
Sbjct: 1322 PSHLHALLDAQHPADVLPAHAL------VMGGETLPWSLVERIA-ALNPTCRVINHYGPT 1374
Query: 377 E----SLPISMIASDELFTTTQVTDNGGGICVGRAIDGVKIEIIAITEADIPEWDNRLCL 432
E +L AS + T T + + +G + ++ A +P
Sbjct: 1375 EATVGALTCDTSASAQAALRTLSTRSAQAVPLGLPLPNAYACVLDSHGASVP-------- 1426
Query: 433 NAGEIGEIVVTGQMVSQSYYHREKATAAS-------------KIWDSERQTFRHRMGDLG 479
G IGE+ + G +++ Y +R ATA + D R R+ LG
Sbjct: 1427 -PGAIGELYLGGPGLARGYLNRAAATAERFVPNPFAPGERLYRTGDRVRLRADRRLDSLG 1485
Query: 480 YLDDSGRL 487
LDD ++
Sbjct: 1486 RLDDQVKI 1493
Score = 75.1 bits (183), Expect = 4e-17
Identities = 99/434 (22%), Positives = 172/434 (39%), Gaps = 64/434 (14%)
Query: 68 QELDFISLNKQSDAIAFALNAYGLTRGMKAVLMVTPSLDFFALTFALFKAGIIPVLVDPG 127
Q++ + L+ +D +A +L G+ L V S D + KAG + +DP
Sbjct: 2645 QQMSYGELDANADRVAASLIQAGVRADTAVALCVERSFDMVVALIGVLKAGAAYLPIDPD 2704
Query: 128 MGIKNLKQCFIEAAPDAFIGIPKAHIARRLLGWGKASVKRLINVDANQSGVTDTLSRLLT 187
+ +A P + P H+ R++ + ++ VDA + G TLS +
Sbjct: 2705 YPADRIAYLLDDAKPAVVLTQP--HLLERVMAAVDRTRVSILAVDALR-GADFTLSAPVP 2761
Query: 188 GAPSLASMLSFTTKSSSAKLPEQVEYPMALLEHDEMAAILFTSGSTGTPKGVVYSHGMFE 247
AP D++A +++TSGSTG PKG +H
Sbjct: 2762 VAP------------------------------DQLAYLIYTSGSTGKPKGAGNTHRALA 2791
Query: 248 AQIQALKQDYGIAHGERDLATFPLFSLFGPALGMTSIV-PEMDASKPITA------NPEF 300
+I ++ Y + + L P FG + + V P +K A +P
Sbjct: 2792 NRIAWMQDVYRLDANDVVLHKTP----FGFDVSVWEFVWPLAIGAKLAIAAPGDHRDPAR 2847
Query: 301 LFAAIEKYQCSNIFVNPALLERLGRAGEQTDSKNQHKLSSVKRVISAGAPATIASIARFS 360
L AAIE ++ + + P++L A D + + +SV+R++++G +AR +
Sbjct: 2848 LVAAIETHRVTTLHFVPSMLAAF--AAHLEDFRAAARCASVERIVASGEALAPELVARVA 2905
Query: 361 KMLSDGVPVLNSYGATESLPISMIASDELFTTTQVTD-NGGGICVGRAIDGVKIEIIAIT 419
L + N YG TE+ A D T D + + +G I ++++++
Sbjct: 2906 GQLPH-ARLYNLYGPTEA------AIDVSHWTCDARDADAASVPIGHPIANLQLQVLDAA 2958
Query: 420 EADIPEWDNRLCLNAGEIGEIVVTGQMVSQSYYHREKATAASKIWDS-ERQTFRHRMGDL 478
+P+ G IGE+ + G +++ Y R TA + D R +R GDL
Sbjct: 2959 LQPLPQ---------GAIGELYLGGVGLARGYLGRAALTAERFVPDPFSRGARLYRTGDL 3009
Query: 479 GYLDDSGRLWMCGR 492
G L GR
Sbjct: 3010 ARRRADGALDYLGR 3023
Score = 50.8 bits (120), Expect = 9e-10
Identities = 104/466 (22%), Positives = 172/466 (36%), Gaps = 76/466 (16%)
Query: 41 LAAHHIPHHLAVAVQQGKGKSFANLTYQELDFI--SLNKQSDAIAFALNAYGLTRGMKAV 98
+A HH H A+A + A+ T + L+ ++ +A L A G+T ++
Sbjct: 6 IALHHQIH--AMARIDPDAPALASFTPHTVRLTRGELDSRAARLAAQLRAAGVTTEVRVG 63
Query: 99 LMVTPSLDFFALTFALFKAGIIPVLVDPGMGIKNLKQCFIEAAPDAFIGIPKAHIARRLL 158
+ V S D F A+ KAG + V +DP L +A I A A R
Sbjct: 64 VCVARSCDLFVALLAVLKAGGVFVALDPRHPAARLDWVARDAGLMHGIVDGSADAAMR-- 121
Query: 159 GWGKASVKRLINVDANQSGVTDTLSRLLTGAPSLASMLSFTTKSSSAKLPEQVEYPMALL 218
+ D + TD + G ++ P+
Sbjct: 122 ------ARFTQCFDVASAAATDAAAPRFDG--------------------DEANTPV--- 152
Query: 219 EHDEMAA-ILFTSGSTGTPKGVVYSHGMFEAQIQALKQDYGIAHGERDL--ATFPLFSLF 275
H AA +++TSGSTGTPK V HG A +AL I +R L A+
Sbjct: 153 -HPRAAAYMIYTSGSTGTPKAVAVEHGPLAAHGEALADSLPIGANDRVLHFASVNFDVSI 211
Query: 276 GPALGMTSIVPEMDASKPITANPEFLFAAIEKYQCSNIFVNPALLERLGRAGEQTDSKNQ 335
L ++ + S P PE A + + +N + PA + E+
Sbjct: 212 EAWLVPLAVGGSVVISDPPPFAPETTHAFMLREGITNTTLPPAYVREFANVCERLGVP-- 269
Query: 336 HKLSSVKRVISAGAPATIASIARFSKMLSDGVPVLNSYGATESLPISMIASDELFTTTQV 395
S++ ++ G + S ++ V ++N YG TE++ M+ + T +
Sbjct: 270 ---PSLRTLLFGGEAMSQDSFDEIRRVF-PAVRLVNGYGPTEAVISPMLWPVDPGMTPLL 325
Query: 396 TDNGG------GICVGRAIDGVKIEIIAITEADIPEWDNRLCLNAGEIGEIVVTGQMVSQ 449
D G G +GR + +I+ A GE GE+++ G +++
Sbjct: 326 DDGNGFASLPIGWPIGRRV--ARIDGAA---------------RQGESGELLLGGVCLAR 368
Query: 450 SYYHREKATAASKIWDSERQTFR--HRMGDL------GYLDDSGRL 487
Y+ R TA + D+ + +R GDL G D GR+
Sbjct: 369 GYHGRAALTAERFLPDASGEPGERIYRTGDLARERVDGSFDYLGRI 414