Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 520 a.a., AMP-binding protein from Burkholderia phytofirmans PsJN

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 116/510 (22%), Positives = 196/510 (38%), Gaps = 86/510 (16%)

Query: 41  LAAHHIPHHLAVAVQQGKGKSFANLTYQELDFISLNKQSDAIAFALNAYGLTRGMKAVLM 100
           LAA   P H+AV               + L    L +  DA    L  +G+  G + +++
Sbjct: 30  LAAARDPQHIAVIEDA-----------RRLTSAQLLEAVDAATALLREWGVRGGDRVMIV 78

Query: 101 VTPSLDFFALTFALFKAGIIPVLVDPGMGIKNLKQCFIEAAPDAFIGIPKAHIARRLLGW 160
              S+    L FA  +     ++ +  +    L                +AH   R++ +
Sbjct: 79  AENSIVQIVLLFATARLDAWALVSNARLSAAELDSI-------------RAHAQPRIVAY 125

Query: 161 GKASVKRLINVDANQSGVTDTLSRLLTGAPSLASMLSFTTKSSSAKLPEQVEYPMALLEH 220
              S     + DA         ++     P + +  S+T  S++      V  P+     
Sbjct: 126 ATES-----SADAKLHAERHHAAKAPAFTPDIGAW-SYTVDSAA------VAEPVEAASE 173

Query: 221 DEMAAILFTSGSTGTPKGVVYSHG--MFEAQIQALKQDYGIAHGERDLATFPLFSLFGPA 278
            + AA+++T+G+TG PKGV+ SH   +F A I +  +  G    +   A  P+  ++G A
Sbjct: 174 RQCAALIYTTGTTGAPKGVMLSHRNLLFIAAISSRLRKVG--PDDVVYAVLPISHVYGFA 231

Query: 279 LGMTSIVPEMDASKPITANPEFLFAAIEKYQCS---NIF-----VNPALLERLGRAGEQT 330
              +  +  + A   +   P F   A+ +       +IF     ++  LLE L   G   
Sbjct: 232 ---SVCLGSLHAGATLRLVPRFAPEAVRRALADERVSIFQGVPAMHAKLLEHLQTHGHAW 288

Query: 331 DSKNQHKLSSVKRVISAGAPATIASIARFSKMLSDGVPVLNSYGATESLPISMIASDELF 390
            + +      ++   S G+P   A  A+   +   G+P+ N YG TES P          
Sbjct: 289 SAPH------LRFAYSGGSPLDAALKAQVESVC--GLPLHNGYGMTESSP--------TV 332

Query: 391 TTTQVTDNGGGICVGRAIDGVKIEIIAITEADIPEWDNRLCLNAGEIGEIVVTGQMVSQS 450
           + T +        VG  I GV++  + +   D  +         G+IGE+ V G  V   
Sbjct: 333 SHTMLDAPRSDCSVGEVIPGVEVRFVGLDGIDAAQ---------GDIGELWVRGPNVMLG 383

Query: 451 YYHREKATAASKIWDSERQTFRHRMGDLGYLDDSGRLWMCGRKAHRVDATQGGQFAKRYY 510
           YY   + T A+   D   +T     GDL   D  G L + GR    +  +         Y
Sbjct: 384 YYRSLEQTRAAVTEDGWLKT-----GDLARQDADGALHIVGRSKELIIRS-----GFNVY 433

Query: 511 SIPCERIFNTHPNVKRSALVGVTVKGQHGV 540
               E + N HP V +SA++G  V+G   V
Sbjct: 434 PAEVEHVLNAHPQVVQSAVIGRAVEGNEEV 463