Pairwise Alignments

Query, 614 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 601 a.a., long-chain fatty acid--CoA ligase from Burkholderia phytofirmans PsJN

 Score = 79.3 bits (194), Expect = 4e-19
 Identities = 118/517 (22%), Positives = 197/517 (38%), Gaps = 65/517 (12%)

Query: 63  ANLTYQELDFISLNKQSDAIAFALNAYGLTRGMKAVLMVTPSLDFFALTFALFKAGIIPV 122
           ANLTY EL      +++ A A  L + G+  G +  +M+  +  +    F + KAG + V
Sbjct: 82  ANLTYGEL-----GRKATAFAAYLQSIGVKPGERVAIMLPNTFQYPVSLFGVLKAGGVVV 136

Query: 123 LVDPGMGIKNLKQCFIEAAPDAFIGIPKAHIARRLLGWGKASVKRLINVDANQSGVTDTL 182
            V+P   ++ L     ++     I             + K     L         VT   
Sbjct: 137 NVNPLYTVRELAHQLKDSGAQTIIVFEN---------FAKTVEDALPGTKVQNVIVTGLG 187

Query: 183 SRLLTGAPSLASMLSFTTKSSSAKLPE-QVEYPMALLE----------------HDEMAA 225
             L  G      +L+F  +     +P   +   + LLE                HD++A 
Sbjct: 188 DLLADGLNLKGRLLNFMLRHVKKMVPAYNLPKAVPLLEALSTGYSRPLTPVRPTHDDIAF 247

Query: 226 ILFTSGSTGTPKGVVYSHGMFEAQ-IQALKQDYGIAHGERD--LATFPLFSLFGPALGMT 282
           + +T G+TG  KG + +H    A  +QA     G   GE +  L   PL+ ++   +   
Sbjct: 248 LQYTGGTTGVAKGAMLTHKNIIANLLQAKAWSEGQLTGEVETVLTPLPLYHIYSLTVN-A 306

Query: 283 SIVPEMDASKPITANPEFLFAAIEKYQCSNIFVNPALLERLGRAGEQTDSKNQHKLSSVK 342
            I   +     + ANP  +   +   +    F     +  L  A    +   +   S +K
Sbjct: 307 LIFMGLGGRNILIANPRDMKRVMMIIRHEK-FTGMTAVNTLYNAFLDNEEFCKRDFSDLK 365

Query: 343 RVISAGAPATIASIARFSKMLSDGVPVLNSYGATESLPISMIASDELFTTTQVTDNGGGI 402
            +  AG  AT  S+A   K ++ G P++  YG TE  PI  +   +L   + + D  G I
Sbjct: 366 -LAMAGGMATQKSVAERFKAVT-GKPIIEGYGLTECSPIVSMNPVDL---SNMRDFEGSI 420

Query: 403 CVGRAIDGVKIEIIAITEADIPEWDNRLCLNAGEIGEIVVTGQMVSQSYYHREKATAASK 462
            +      V+         D   W      N GE GE+ V G  V + Y++R   TA  K
Sbjct: 421 GLPAPSTQVRF------RKDDGSW-----ANIGEAGELCVKGPQVMKGYWNRPDETA--K 467

Query: 463 IWDSERQTFRHRMGDLGYLDDSGRLWMCGRKAHRVDATQGGQFAKRYYSIPCERIFNTHP 522
           + D +        GD+G +D  G + +  RK   +  +         Y    E +   HP
Sbjct: 468 VIDEDGWL---ATGDIGVMDSRGFIRLIDRKKDMILVS-----GFNVYPNEVEDVIAAHP 519

Query: 523 NVKRSALVGVTVKGQHGVGEIKPLICIELDQSLVCNK 559
           +V+  A +GV    Q   GE   +  ++ + SL   +
Sbjct: 520 DVREVAAIGVPDAAQ---GERVKVFIVKRNPSLTAEQ 553