Pairwise Alignments

Query, 166 a.a., ACT domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 184 a.a., glycine cleavage system protein R from Dyella japonica UNC79MFTsu3.2

 Score = 43.9 bits (102), Expect = 1e-09
 Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 7/166 (4%)

Query: 5   LITLQAPDRKGLVEQIAHAVSRHGGNWLDSELRHIDGIFAAILLLEVPSM----RIDELI 60
           LI    P ++  +  +A  ++  G N  D+ +  I G+  ++ LL   S     +++  +
Sbjct: 14  LIQALTPAQRSPLLNLARRIADAGCNLADARVSSI-GVDTSLTLLATGSWDAVAKLESAL 72

Query: 61  EALECIDGLTLTYAKTSVALKPIRRLSY--SLVSYDRPGLVLDISNRITALGINIEQFSS 118
                 + + L + +T    +  R L Y   ++S DRPG+++ I +     GI +EQ  S
Sbjct: 73  AKFAREEDVHLVHYRTDTRAQASRLLPYLVEVISADRPGILVRIIDFFDRHGIAVEQLHS 132

Query: 119 QFETAGHTGIALFRATIGLGLTELAQEEQLVQSLYALGDDLVLDKL 164
               A  TG  +F+A I +G+        L        D L LD +
Sbjct: 133 MRYQAMQTGAPMFQAQITVGIPADTHIAALRDDFLEFCDGLNLDAI 178



 Score = 24.3 bits (51), Expect = 0.001
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 1   MLRYLITLQAPDRKGLVEQIAHAVSRHG 28
           +L YL+ + + DR G++ +I     RHG
Sbjct: 97  LLPYLVEVISADRPGILVRIIDFFDRHG 124