Pairwise Alignments

Query, 217 a.a., DedA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 216 a.a., SNARE associated Golgi protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 82.8 bits (203), Expect = 4e-21
 Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 12/177 (6%)

Query: 33  LCFLVM--ENGFIPTAFLPGDTLLILTGVLIYQDVLHMGIVPL---LMVATFIGTAIGYL 87
           + FLV+  E G + T FLPGD+LL   G +      H+   PL   L+ A  IG A+ Y 
Sbjct: 35  ILFLVVFCETGLVVTPFLPGDSLLFAAGTIAGAG--HLEYFPLAFTLLAAAIIGDAVNYR 92

Query: 88  QGYFLGHTQMYHRLLSHIDDKHQKKALYLIDKYGILTLLVARYIPFVRTIYPYIIGATGV 147
            G ++G   ++ R    ++ +H  +A    +++G   +++AR++P VRT  P++ G   +
Sbjct: 93  IGRYVG-PPVFERNYRLLNRQHLYRAHEFYERHGGKAIVLARFVPVVRTFAPFVAGVAAM 151

Query: 148 SWSRFLVINFISSVMWITPLVGFGYVISHSKLANEYQTQFMSIIVYLPIVLLVSGIV 204
              RFL+ N   +V+W+  LV  GY + +  +    Q  F S+++Y  IV+ V  IV
Sbjct: 152 DARRFLLFNASGAVVWVGLLVTAGYFLGNMPVV---QRNF-SLVIYGIIVVSVLPIV 204