Pairwise Alignments

Query, 217 a.a., DedA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 219 a.a., membrane protein from Klebsiella michiganensis M5al

 Score = 83.2 bits (204), Expect = 3e-21
 Identities = 55/218 (25%), Positives = 111/218 (50%), Gaps = 21/218 (9%)

Query: 1   MDQLYQLAQAMIHNDLAVLSN-PNVTLMVSGVILCFLVMENGFIPTAFLPGDTLLILTGV 59
           MD ++ L   ++H D+ +        + V  ++   L  E G + T FLPGD+LL + G 
Sbjct: 1   MDLIHFLIDFILHIDVHLAELVAEYGIWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA 60

Query: 60  L--IYQDVLHMGIVPLLMV-ATFIGTAIGYLQGYFLG-------HTQMYHRLLSHIDDKH 109
           L  +  + L++ ++ LLMV A  +G A+ Y  G   G       +++++ R  S++D  H
Sbjct: 61  LSALPTNDLNVHLMVLLMVIAAIVGDALNYTIGRLFGEKLFSNPNSKIFRR--SYLDKTH 118

Query: 110 QKKALYLIDKYGILTLLVARYIPFVRTIYPYIIGATGVSWSRFLVINFISSVMWITPLVG 169
                   +++G  T+++AR++P VRT  P++ G   +S+  F + N + +++W+     
Sbjct: 119 S-----FYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAMYNVVGALLWVLLFTY 173

Query: 170 FGYVISHSKLANEYQTQFMSIIVYLPIVLLVSGIVTLI 207
            GY+     +  E       +IV + ++ ++ G++ +I
Sbjct: 174 AGYLFGDLPIVQE---NLKLLIVAIIVLSVLPGVIEVI 208