Pairwise Alignments

Query, 217 a.a., DedA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 223 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 87.4 bits (215), Expect = 2e-22
 Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 16/222 (7%)

Query: 1   MDQLYQLAQAMIHNDLAVLSNPNVT-LMVSGVILCFLVMENGFIPTAFLPGDTLLILTGV 59
           MD L      ++H D  +    +V    V  V+   +  E G +   FLPGD+LL + G 
Sbjct: 1   MDTLLHFVNLVLHIDKFLGDFIHVYGAWVYAVLFLIVFCETGLVILPFLPGDSLLFIGGA 60

Query: 60  LIYQDVLHMGI-VPLLMVATFIGTAIGYLQGYFLG------HTQMYHRLLSHIDDKHQKK 112
                 +++G+ + LL+VA   G  + Y+ G  +G      H     R L   D    +K
Sbjct: 61  FCATGEMNIGLLIVLLLVAAIAGNTVNYMIGRAIGPRVFNSHIPFLERFL---DRSALQK 117

Query: 113 ALYLIDKYGILTLLVARYIPFVRTIYPYIIGATGVSWSRFLVINFISSVMWITPLVGFGY 172
                +K+G  T+++AR+IP VRT  P++ GA+ ++ SRF + NF  +  W+  L   GY
Sbjct: 118 THNFYEKHGGKTIVLARFIPVVRTFAPFVAGASEMTVSRFQLFNFAGAFFWVLLLTLLGY 177

Query: 173 VISHSKLANEYQTQFMSIIVYLPI-VLLVSGIVTLIYKWLRK 213
              +     +Y    +++IV + I   +V  ++  ++K +RK
Sbjct: 178 FFGNIPFIRQY----LNVIVLVGIGAAVVPVVLGALWKMMRK 215