Pairwise Alignments

Query, 300 a.a., 3-hydroxyisobutyrate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 276 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  186 bits (472), Expect = 5e-52
 Identities = 102/272 (37%), Positives = 155/272 (56%), Gaps = 4/272 (1%)

Query: 4   VAFIGLGNMGGPMAANLLKAGMTVRVFDLVHTAMQTLAEQGALVSSTACGAAAGANVVIT 63
           + FIG G MG  M +NLLK    V V D    A   +A  GA ++        G ++VIT
Sbjct: 3   IGFIGAGRMGHRMISNLLKGSHAVLVLDGARDARDRVASLGATLAMNLADLVTGQDIVIT 62

Query: 64  MLPAGKHVKNLYLGSGSEKGLLDVVASDTLLIDCSTIDAQSAQLVATQAAKNGLEFMDAP 123
           MLP      ++Y G+G   GL  +   +TLL++CST+D ++ + +   A  +G + +DAP
Sbjct: 63  MLPTPDVSLSVYEGAG---GLFSITPPETLLLECSTVDVKTIERLGEGARASGTQLIDAP 119

Query: 124 VSGGTSGAAAGTLTFICGGSDTAFERAQPVLNAMGKNIFHAGGPGAGQIAKICNNMLLSV 183
           ++GG  GAA  TLTF+ GGS+   E A+P L +MG  I HAG  G+G   K+ NNM+ + 
Sbjct: 120 LTGGIEGAALATLTFMVGGSEEQLEYARPALQSMGSRIVHAGRFGSGTKLKLVNNMICAT 179

Query: 184 LMVGTSEALQMGIDHGLDPKVLSNIMKVSSGGNWTLEKYNPCPGVMENVPSSKGYQ-GGF 242
            ++  SEAL +G+  GLD + + +++   +G +W L  Y P PGV++  PSS+G++   F
Sbjct: 180 NLMVASEALTLGLKLGLDAQPMYDVIANGTGASWVLNTYYPLPGVVDGAPSSRGFRMPTF 239

Query: 243 MVDLMVKDLGLSFEAALLSNSSTPMGALARSL 274
               M KD+  + EAA    + TP+  +A SL
Sbjct: 240 PATGMAKDMRCALEAARSVEAVTPLHNVAESL 271