Pairwise Alignments

Query, 247 a.a., short chain dehydrogenase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 246 a.a., Short-chain dehydrogenase/reductase SDR from Pseudomonas syringae pv. syringae B728a

 Score = 62.8 bits (151), Expect = 6e-15
 Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 32/249 (12%)

Query: 7   IIVGASSHLSRELAKQLADQQVELALFAQDVESLREFASTLPTK----VQVFSLQIEQPS 62
           +I+GA+S ++   A++ A Q  +  L A++ + L   A+ L  +    V  + + +   S
Sbjct: 5   LIIGATSTIAHACARRWATQGCDFFLVARNTDKLVSNAADLRARGAGHVDTYQMDVTHFS 64

Query: 63  AIIEQLENVWQSLGGAHLVLVNTGLNSYDPELPWLPEQDIIDVNVRGFA----------- 111
                L +    L    +VL+  G          LP+Q   + N  G A           
Sbjct: 65  EHPAMLADCLAVLQQIDVVLLAHGT---------LPDQKACEQNA-GLAVQEFITNGASV 114

Query: 112 -AICNTAFRLFREQGYGQLAAINSIAGLRGGPS-VAYHASKAFAQNYLEGLSMHAQRLKL 169
            A+     R F  Q  G LA I+S+AG RG PS   Y ++KA    + +GL   A+  KL
Sbjct: 115 IALLTVLARQFEVQRCGTLAVISSVAGDRGRPSNYLYGSAKAAVSTFCDGL--QARMFKL 172

Query: 170 PITITDIQLGLLDKAAMQQSTL--WLAPLPQ-VAAQIIKAMQQGKRRVYVTKRWRLVAWL 226
            + +  I+ G +D    +   L  WL   P+ VA +I+  + +    +Y    W  + W+
Sbjct: 173 GVHVVTIKPGFVDTPMTRGLPLPAWLVAQPEDVAERIVNGIARQSTSLYAPGFWAWIMWV 232

Query: 227 TKLLPEFIY 235
            + +P+ ++
Sbjct: 233 IRSIPQPLF 241