Pairwise Alignments

Query, 247 a.a., short chain dehydrogenase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 259 a.a., Short-chain dehydrogenase/reductase SDR (NCBI) from Rhodospirillum rubrum S1H

 Score = 61.6 bits (148), Expect = 1e-14
 Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 12/238 (5%)

Query: 8   IVGASSHLSRELAKQLADQQVELALFAQ---DVESL-REFASTLPTKVQVFSLQIEQPSA 63
           I GA   + R LA  LA +   +A  A+   D+++L  E   +    +  F+L   QP A
Sbjct: 11  ITGAGKGIGRALALHLAAEGATVAASARTLGDLDTLVAEADRSKGGSIHPFALDTTQPEA 70

Query: 64  IIEQLENVWQSLGGAHLVLVNTGLNSYDPELPWLPE--QDIIDVNVRGFAAICNTAFRLF 121
           +   +E +   LG     ++N G +       +  +  + +I+VN+ G A+         
Sbjct: 71  VAAGVEAIEGGLGPITQAVLNAGTDQSMGVADFSTQTLRAVIEVNLLGTASCLEAVLPPM 130

Query: 122 REQGYGQLAAINSIAGLRGGP-SVAYHASKAFAQNYLEGLSMHAQRLKLPITITD---IQ 177
           R +  G++A ++S+AG RG P + AY  +KA   N +E L + A +  + + + +   ++
Sbjct: 131 RRRKSGRIAVVSSVAGYRGLPTAAAYGPTKAALTNMMESLKIEAAQAGILLQVINPGFVR 190

Query: 178 LGLLDKAAMQQSTLWLAPLPQVAAQIIKAMQQGKRRVYVTKRWRLVAWLTKLLPEFIY 235
             L D+        +L    + AA+I   ++     +   KR+     L +LLP  +Y
Sbjct: 191 TPLTDRNPFPMP--FLIEADEAAARIADGLRSKAFEITFPKRFTYGLKLARLLPYALY 246