Pairwise Alignments

Query, 247 a.a., short chain dehydrogenase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 259 a.a., SDR family oxidoreductase from Rhodopseudomonas palustris CGA009

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 20/247 (8%)

Query: 1   MTQATAIIVGASSHLSRELAKQLADQQVELALFAQDVESLREFASTLPTK----VQVFSL 56
           MT+   +I GAS+ +  ELA+  AD    +AL A+  + L   A+ +  K      V + 
Sbjct: 1   MTERVTLITGASAGIGVELARIFADNAHRVALVARRGDRLESLAAEIRAKGGPEPIVIAC 60

Query: 57  QIEQPSAIIEQLENVWQSLGGAHLVLVNT---GLNSYDPELPWLPEQDIIDVNVRGFAAI 113
            + +P A  EQ+     + G     LVN    GL     EL    +  IIDVN R    +
Sbjct: 61  DLGKPDA-AEQIIAALAAAGVEVEYLVNNAGYGLFGRAMELDRESQLGIIDVNNRALTDL 119

Query: 114 CNTAFRLFREQGYGQLAAINSIAGLRGGPSVA-YHASKAFAQNYLEGLSMHAQRLKLPIT 172
               F     +  G +  + SIAG   GP +A Y+ASKA+  ++ E  +MH +     + 
Sbjct: 120 -TLRFADSIARLRGGILNVASIAGFLPGPGMAVYYASKAYVLSFSE--AMHQELGPKGVR 176

Query: 173 IT-----DIQLGLLDKAAMQ---QSTLWLAPLPQVAAQIIKAMQQGKRRVYVTKRWRLVA 224
           +T      +Q    ++A  +    S +      +VA Q  + +   KR V      ++V 
Sbjct: 177 VTALCPGPVQTEFQNRAGFEPGFDSAVLNVTPAEVARQAYQGLMNNKRIVLPGLGVKIVP 236

Query: 225 WLTKLLP 231
           +L +  P
Sbjct: 237 FLLRFFP 243