Pairwise Alignments

Query, 247 a.a., short chain dehydrogenase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 276 a.a., Probable short-chain type dehydrogenase/reductase from Mycobacterium tuberculosis H37Rv

 Score = 57.0 bits (136), Expect = 4e-13
 Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 23/248 (9%)

Query: 6   AIIVGASSHLSRELAKQLADQQVELALFAQDVESLRE---FASTLPTKVQVFSLQIEQPS 62
           A+I GA S + R LA  L++++ +LAL   D + L +    A  L  +V+   L + +  
Sbjct: 9   AVITGAGSGIGRALALNLSEKRAKLALSDVDTDGLAKTVRLAQALGAQVKSDRLDVAERE 68

Query: 63  AIIEQLENVWQSLGGAHLVLVNTGL--NSYDPELPWLPEQDIIDVNVRGFAAICNTAFRL 120
           A++   + V    G  H V  N G+  N    +  +   + IIDV+  G           
Sbjct: 69  AVLAHADAVVAHFGTVHQVYNNAGIAYNGNVDKSEFKDIERIIDVDFWGVVNGTKAFLPH 128

Query: 121 FREQGYGQLAAINSIAGLRGGP-SVAYHASKAFAQNYLEGLSMHAQRLKLPITITDIQLG 179
               G G +  I+S+ GL   P   AY+A+K   + + E L       + P+ +T +  G
Sbjct: 129 VIASGDGHIVNISSLFGLIAVPGQSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPG 188

Query: 180 LLDKAAMQQSTL----------------WLAPLPQVAAQ-IIKAMQQGKRRVYVTKRWRL 222
            +  A  + +T+                     P++AA+ I+  + +G+ RV V    + 
Sbjct: 189 GIKTAVARNATVADGEDQQTFAEFFDRRLALHSPEMAAKTIVNGVAKGQARVVVGLEAKA 248

Query: 223 VAWLTKLL 230
           V  L +++
Sbjct: 249 VDVLARIM 256