Pairwise Alignments

Query, 247 a.a., short chain dehydrogenase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 268 a.a., short-chain dehydrogenase from Herbaspirillum seropedicae SmR1

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 8   IVGASSHLSRELAKQLADQQVELALFAQDVESLREFASTLP--TKVQVFSLQIEQPSAII 65
           + GASS L   LA+  A Q   L L A+    L    + LP   + +V++L +   +A+ 
Sbjct: 15  LTGASSGLGMALARAYASQGAVLGLVARRTAELEALRAALPHAERHRVYALDVTDHAALA 74

Query: 66  EQLENVWQSLGGAHLVLVNTG-----LNSYDPELPWLPEQDIIDVNVRG-FAAICNTAFR 119
               +     GGA +V+ N G     L  +  +L     + I+ VNV   FA       R
Sbjct: 75  AAATSFMDEFGGADVVIANAGISQGTLTEFQEDLAAF--ERILAVNVTATFATFTPFVAR 132

Query: 120 L----FREQGYGQLAAINSIAGLRGGPSV-AYHASKAFAQNYLEGLSMHAQRLKLPITIT 174
           +      ++   +L  I S+AG+RG P   AY ASK+   +Y E  S+  +     I + 
Sbjct: 133 MKASPEAQRRRCRLVGIGSVAGIRGLPGAGAYSASKSAVISYCE--SLRVELRASGIKVV 190

Query: 175 DIQLGLLDKAAMQQSTL---WLAPLPQVAAQIIKAMQQGKRRVYVTKRWRLVAWLTKLLP 231
            I  G +D    + +T    +L P+ + AA+ ++ + +G     +  +  +VA L ++LP
Sbjct: 191 TIAPGYIDTPMTRVNTYRMPFLMPVERFAARAVQTIDEGVSYRVIPWQMGVVAKLLRMLP 250

Query: 232 EFIYNTRHWK-PKKAKK 247
            ++Y+    + P K +K
Sbjct: 251 NWLYDMAFARAPHKQRK 267