Pairwise Alignments

Query, 826 a.a., bacterial surface antigen (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 788 a.a., Outer membrane protein assembly factor YaeT precursor from Pseudomonas fluorescens FW300-N2E2

 Score =  592 bits (1527), Expect = e-173
 Identities = 326/824 (39%), Positives = 488/824 (59%), Gaps = 42/824 (5%)

Query: 7   FASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVDQLKLQQ 66
           F+ +L   A      LA   Q F+++DI++ GLQRV+ G+   +LP+ VGD  D+ +L +
Sbjct: 3   FSRLLCSAALLLNVTLAHA-QGFKISDIRINGLQRVSAGSVFGALPLNVGDNADERRLVE 61

Query: 67  AIKSLYASTNFENISVSHEDGVLIVKVTERPTISAVTFEGNKDIKDEQLQESLDGSGVKV 126
           + ++L+ +  F++I + H+  VL++ V ERP+++++  EGNK I  E L + L  SG+  
Sbjct: 62  STRALFKTGFFQDIQLGHDGDVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAE 121

Query: 127 GESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTESLAAEIRQIN 186
           GE   R  L G+   LQ  Y   G+Y A V+ +V+  PRNRV LK    E   A I+ IN
Sbjct: 122 GEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVPQPRNRVGLKVNINEGTVAAIQHIN 181

Query: 187 VVGNHEFTDAELIGMLELKDYVAWWDLF-GERRYQKQKLQADLETIKTYYHNKGYIRFEV 245
           VVGN  F D +LI + ELK    W   F  + +Y ++KL  DLE +++YY ++GYI  ++
Sbjct: 182 VVGNTVFPDEDLIDLFELKT-TNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDI 240

Query: 246 TSTQVAMTPDRKGLYITINVNEGEKYKVKDVNLTGDLMGREELMKSILPIKAGDMYNGGD 305
            STQV++TPD+K +YIT+NVNEGEKY V+DV L+GDL   E+ +KS+L ++ G +++   
Sbjct: 241 ASTQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKL 300

Query: 306 VTFAEEMYSKYLGRFGYAYPEVKTYPEIDDKTKEVTLNINIKPGKRVYVRSINFTGNTVT 365
           +T   E+ ++ LG  GY +  V   P+  D+   V +   + PGKR YV  INF GNT +
Sbjct: 301 MTTTSELITRRLGNEGYTFANVNGVPQPHDEDHTVDITFAVDPGKRAYVNRINFRGNTKS 360

Query: 366 EDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGFFETVDTETIQVPGTDDLVDVAVKVKE 425
           EDEV+RRE+RQMEG W ++  ++QSK RL RLGFF+ V+ ET  VPG DD VDV   V+E
Sbjct: 361 EDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPAVPGVDDQVDVNYSVEE 420

Query: 426 QPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGVSLSTNKYSKNVNLSYTDPYWTK 485
           Q SGS +A VG+   +GL L   + QNNFLGTGN A + L+ + Y    N+ +TDPY+T 
Sbjct: 421 QASGSISASVGFSQSAGLILGGSITQNNFLGTGNSASLGLTRSSYQSKYNIGFTDPYFTP 480

Query: 486 DGVSLGGSVYWNEFDANE---ANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNTIS 542
           DGVSLG ++++N  D NE    +   Y  +SYG   + G+PINE +R+N G+  +H++I 
Sbjct: 481 DGVSLGYNLFYNATDYNEYYDDDYSYYSINSYGAGTSLGYPINETSRLNFGVTVQHDSI- 539

Query: 543 EISAYEQALRFYNIYRDDDPNADLSFDNFELSLGWYRSTLNRGTFPTDGSSQRLSGKMTV 602
           E   Y     +  I R+        F NF+ +LGW  STLN+G   T G SQ L+   TV
Sbjct: 540 EPGTYSADEIYDFIEREGK-----DFTNFKANLGWSESTLNKGVLATRGHSQSLNLMATV 594

Query: 603 PASDLQYFKTDFDTNYYFPINRSQSFVLLARGRLGYGNGYGQYNDNDQILPFWENYYSGG 662
           P SDL ++K D+    + P+  + S  L    +LGYGN YG  +     LPF+ENY +GG
Sbjct: 595 PGSDLSFYKIDYTGQAFLPVTDATS--LRLHTKLGYGNSYGSTDG----LPFYENYTAGG 648

Query: 663 SSSLRGFKSNSVGPRSFYLFRGSEPCSPDPSGDGCSLPGDPNKIQVSSGRSIGGNAIATA 722
             S+RGF+S ++GPR       + P +   +  G +   D +        S+GGN + T 
Sbjct: 649 EGSVRGFESGTLGPR-------NTPATGTYASAGQAYYSDRDT------ESLGGNILITG 695

Query: 723 SLELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYAKYQTLPAEEFDKLQDYSDPARI 782
            +E + P PF+ +    S+RTS F D G+V+  +   +  Q           D  D +++
Sbjct: 696 GVEYLFPLPFIKD--NKSLRTSVFWDVGSVYSDKCYLSTTQGC---------DGVDLSQM 744

Query: 783 RASWGVSLQWLSPMGPMVFSLAWPVKEYEGDQTEIFSFNIGKTF 826
            +S GV + W SP+GP+  ++A+PV+  +   T++F F++G+TF
Sbjct: 745 ASSVGVGVTWYSPLGPLSANVAFPVRTPDNADTQVFQFSLGQTF 788