Pairwise Alignments

Query, 456 a.a., membrane-associated zinc metalloprotease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 374 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  141 bits (356), Expect = 3e-38
 Identities = 75/233 (32%), Positives = 129/233 (55%), Gaps = 7/233 (3%)

Query: 224 RPAIEPQIALISEGSAAANSDLKVGDTLVAINGQQYTDWQAFVDIIQHSANVPVELTVRR 283
           R   +P +A ++  SAA  + +  GD L++I+G+    +      +     +P+ + + R
Sbjct: 139 RAVADPVVAFVAPDSAAEKAGVLPGDRLLSIDGKPIATFDDVRRYVSVRPELPITVRIER 198

Query: 284 NGEQFAISVTPASIKNSDG----KEIGVLGVSPTQAQWPENMRLQLEYGPIDSFAIAADK 339
            G    + + P   ++ D      E G +G+   Q     N R++  YGP+++    A +
Sbjct: 199 EGAAIDLPMVPQRTESVDPLGNKMEEGKIGIGTNQEAG--NFRVET-YGPLEAVGQGALQ 255

Query: 340 TWQLVAVSFKMIGKLFTGDVSVKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGII 399
           +W++V  +   +  LF G +S   + GPI IAQ +G  A  G+   L F A++SV++G++
Sbjct: 256 SWRIVTGTLDYLSNLFVGRMSADQVGGPIRIAQMSGQMAKLGIAEVLNFAAVLSVSIGLL 315

Query: 400 NLLPLPVLDGGHLLYYFVEVITGKPVSEKVQEIGFRFGAALLLMLMSIALFND 452
           NL+P+PVLDGGHL++Y VE + G+PV    Q++ FR G A++LML   A +ND
Sbjct: 316 NLMPVPVLDGGHLMFYAVEALRGRPVGPAAQDLAFRIGFAMVLMLTVFAAWND 368



 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 12/177 (6%)

Query: 1   MLDFL-WNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKTIWRKVGKDGTEY 59
           +LD L + + +F+  L LL+  HE GH+ V R  G+++  FS+GFG  ++    + GT +
Sbjct: 4   LLDNLQYTIPTFLFLLTLLVFVHEMGHYLVGRWSGIRILAFSVGFGPELFGWTDRHGTRW 63

Query: 60  VVAMIPLGGYVKMLDE----------RVEDVPEELKDQAFNRKSVWQRIAIVAAGPIANF 109
               +PLGGYVK   +          R+E +  E + + F    +W+R A VAAGPIANF
Sbjct: 64  KFCAVPLGGYVKFFGDEDAASTPDYRRLETIAPEERGRTFLGAKLWKRAATVAAGPIANF 123

Query: 110 IFAIIALYFMYLI-GVPSLKPVITSTTPGSAAAQIKVNEPMQVTAISGQAVRNWEEV 165
           + AI     ++ I G     PV+    P SAA +  V    ++ +I G+ +  +++V
Sbjct: 124 LLAIAIFAVLFSIYGRAVADPVVAFVAPDSAAEKAGVLPGDRLLSIDGKPIATFDDV 180