Pairwise Alignments

Query, 456 a.a., membrane-associated zinc metalloprotease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 367 a.a., Peptidase M50, putative membrane-associated zinc metallopeptidase (NCBI) from Rhodospirillum rubrum S1H

 Score =  158 bits (399), Expect = 3e-43
 Identities = 86/241 (35%), Positives = 140/241 (58%), Gaps = 9/241 (3%)

Query: 218 LGLGVYRPAIEPQIALISEGSAAANSDLKVGDTLVAINGQQYTDWQAFVDIIQHSANVPV 277
           L + + +P   P +  +  GSAAA + L  GD +VAI+G     +Q    ++  S   P+
Sbjct: 128 LYMTIGQPHSAPVVGEVIAGSAAAEAGLLAGDRIVAIDGTPIDRFQDVRRVVPLSNGAPL 187

Query: 278 ELTVRRNGEQFAISVTPASIKNSDGK----EIGVLGVSPTQAQWPENMRLQLEYGPIDSF 333
            + + R+    A+   P  ++  DG     ++  LGV  + +Q  +  RL    GP+D+ 
Sbjct: 188 HIDILRDNAPLAVIALPRMVETDDGLGNKVQVAQLGVKVSLSQ-ADVQRL----GPLDAL 242

Query: 334 AIAADKTWQLVAVSFKMIGKLFTGDVSVKNLSGPISIAQGAGNSANYGLVYFLGFLALIS 393
             A  +TWQL A +   +G++  G+ S + L GP+ IAQ +G +A  G++  + F+AL+S
Sbjct: 243 GQAVGQTWQLSADTLTYLGQVVRGNRSAEELGGPVRIAQFSGKAAERGVLDLVTFIALLS 302

Query: 394 VNLGIINLLPLPVLDGGHLLYYFVEVITGKPVSEKVQEIGFRFGAALLLMLMSIALFNDF 453
           VNLG+INL P+P+LDGGHL++Y +E + G+P+  + QE G RFG AL+L +M  A +ND 
Sbjct: 303 VNLGLINLFPIPMLDGGHLMFYTIEALRGRPLGARAQEYGLRFGLALVLAMMVFATWNDL 362

Query: 454 A 454
           +
Sbjct: 363 S 363



 Score =  115 bits (287), Expect = 3e-30
 Identities = 66/175 (37%), Positives = 102/175 (58%), Gaps = 10/175 (5%)

Query: 1   MLDFLWNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKTIWRKVGKDGTEYV 60
           MLD L  + SF+V L  ++  HE+GHF VAR  GV+VE FSIGFG+ ++    + GT + 
Sbjct: 1   MLDLLHTVLSFLVVLTAVVFVHEFGHFLVARLNGVRVEVFSIGFGRELFGFNDRYGTRWR 60

Query: 61  VAMIPLGGYVKMLD---------ERVEDVPEELKDQAFNRKSVWQRIAIVAAGPIANFIF 111
           ++++PLGGYV+            E    + +  +  +F+ K V QR AIV AGP+ANF+F
Sbjct: 61  LSLLPLGGYVRFFGDADETSGTAETTRPLSKAEEAVSFHHKRVGQRFAIVLAGPMANFLF 120

Query: 112 AIIALYFMYL-IGVPSLKPVITSTTPGSAAAQIKVNEPMQVTAISGQAVRNWEEV 165
           +I+    +Y+ IG P   PV+     GSAAA+  +    ++ AI G  +  +++V
Sbjct: 121 SIVVFAGLYMTIGQPHSAPVVGEVIAGSAAAEAGLLAGDRIVAIDGTPIDRFQDV 175