Pairwise Alignments

Query, 456 a.a., membrane-associated zinc metalloprotease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 354 a.a., membrane-associated zinc metalloprotease (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  122 bits (305), Expect = 2e-32
 Identities = 68/233 (29%), Positives = 120/233 (51%), Gaps = 10/233 (4%)

Query: 227 IEPQIALISEGSAAANSDLKVGDTLVAINGQQYTDWQAFVDIIQHSANVPVELTVRRNGE 286
           + P++  +   S AA + +  GD +V+I G+    W      I  S    + + + RNG 
Sbjct: 125 LAPEVGRVQPESPAAIAGVAPGDRVVSIGGKPVQWWDDVAGSIVASEGRELAIAIDRNGT 184

Query: 287 QFAISVTPASIKNS----DGKEIGVLGVSPTQAQWPENMRLQLEYGPIDSFAIAADKTWQ 342
              ++V P          + +   ++G+  +         + L      +     D+TW+
Sbjct: 185 ALTLNVKPEVRTRKTIFGEDERTWLIGIQAS------GRTVSLPLDGTSAMKAGLDQTWR 238

Query: 343 LVAVSFKMIGKLFTGDVSVKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGIINLL 402
           ++ ++ + + K+F   V + ++ GPI IAQ     +  GL   L   ALIS+NLG++NLL
Sbjct: 239 MIVITGQSVQKIFERVVPLDSVGGPIMIAQMVSEQSRQGLDSVLALTALISINLGLLNLL 298

Query: 403 PLPVLDGGHLLYYFVEVITGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFAR 455
           P+PVLDGGH+++  +E++  +PV+ +++EI  R G A LL LM +A +ND  R
Sbjct: 299 PIPVLDGGHIIFLTMEMVMRRPVNARLREITTRIGLAFLLALMLLATYNDIVR 351



 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 59/168 (35%), Positives = 95/168 (56%), Gaps = 4/168 (2%)

Query: 10  SFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKTIWRKVGKDGTEYVVAMIPLGGY 69
           S ++ LG LI  HE GHF +AR  G+ V+ FS+GFG  ++   G   T+Y ++++PLGGY
Sbjct: 6   SVLLVLGGLIFFHELGHFLIARLFGIGVQTFSLGFGPRLFGWRGGQ-TDYRLSLVPLGGY 64

Query: 70  VKMLDERVE-DVPEEL-KDQAFNRKSVWQRIAIVAAGPIANFIFAIIALYFMYLI-GVPS 126
           V ++ E  E ++PE   K  +F  +  WQR+ ++AAGP+ N + A    + ++   G   
Sbjct: 65  VSLVGESEEAELPEGFEKRHSFTLRPAWQRLLVIAAGPVFNLLLAWFIYWGLFWAHGQFQ 124

Query: 127 LKPVITSTTPGSAAAQIKVNEPMQVTAISGQAVRNWEEVNLALVGHIG 174
           L P +    P S AA   V    +V +I G+ V+ W++V  ++V   G
Sbjct: 125 LAPEVGRVQPESPAAIAGVAPGDRVVSIGGKPVQWWDDVAGSIVASEG 172



 Score = 25.4 bits (54), Expect = 0.003
 Identities = 15/74 (20%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 120 YLIGVPSLKPVITSTTPGSAAAQIKVNEPMQVTAISGQAVRNWEEVNLALVGHIGDDSLT 179
           +LIG+ +    ++    G++A +  +++  ++  I+GQ+V+   E  +  +  +G   + 
Sbjct: 208 WLIGIQASGRTVSLPLDGTSAMKAGLDQTWRMIVITGQSVQKIFE-RVVPLDSVGGPIMI 266

Query: 180 VSLAPLSGLQGLDT 193
             +      QGLD+
Sbjct: 267 AQMVSEQSRQGLDS 280