Pairwise Alignments

Query, 275 a.a., undecaprenyl diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 251 a.a., Undecaprenyl pyrophosphate synthetase from Pseudomonas syringae pv. syringae B728a

 Score =  266 bits (679), Expect = 4e-76
 Identities = 132/245 (53%), Positives = 168/245 (68%)

Query: 26  EVLPELVKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLT 85
           E +   V  S+P+HVAIIMDGN RWA+ +  P V GHKAGV AVR  +   ++  ++ LT
Sbjct: 2   EKIKPAVPSSVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEARVEVLT 61

Query: 86  LFAFSSENWRRPDKEVSLLMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRA 145
           LFAFSSENW+RP +EV  LMELFFT L+RE K L++N++ L IIGD SRF   LQ  +R 
Sbjct: 62  LFAFSSENWQRPAEEVGALMELFFTALRRETKRLNENEISLRIIGDRSRFHPELQAAMRE 121

Query: 146 AEEKTAGNSGLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQ 205
           AE +T+GNS  +L +AANYGG+WDI QAAQ+LA +V+ G +     T + L   L   + 
Sbjct: 122 AEVRTSGNSRFVLQIAANYGGQWDIAQAAQRLAREVQAGHLQPEDITPQLLQTCLATGDL 181

Query: 206 SEVDLIIRTGGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFANRQRRFGLT 265
              DL IRTGG++RISNF+LWQ AYAEL F D  WPDF   A   A+A FA+RQRRFG T
Sbjct: 182 PLPDLCIRTGGEHRISNFLLWQLAYAELYFSDLFWPDFKHDAMRAALADFASRQRRFGKT 241

Query: 266 GSQID 270
             Q++
Sbjct: 242 SEQVE 246