Pairwise Alignments

Query, 275 a.a., undecaprenyl diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 252 a.a., isoprenyl transferase from Rhodopseudomonas palustris CGA009

 Score =  211 bits (538), Expect = 1e-59
 Identities = 109/229 (47%), Positives = 149/229 (65%)

Query: 35  SLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLFAFSSENW 94
           S P HVAIIMDGNGRWA  +G PR  GH+ GV+A+RR V A+S+LGIQ LT+F+FSSENW
Sbjct: 16  SAPAHVAIIMDGNGRWAAARGLPRAEGHRRGVEALRRVVRASSELGIQYLTIFSFSSENW 75

Query: 95  RRPDKEVSLLMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRAAEEKTAGNS 154
            RP  E+  L  L    ++ ++  L ++ V++ +IG+  R    L   +  A+E T  N+
Sbjct: 76  ARPATEIVDLFGLLRRFIRNDLASLHRDGVRIRVIGERDRLDRDLCAMLDEAQELTRNNT 135

Query: 155 GLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQSEVDLIIRT 214
            L L VA NYG R +I  AAQ+LA +V  G+   +    E L  +L   +  + DLIIRT
Sbjct: 136 KLNLVVAFNYGSRQEIANAAQRLAREVAEGKRDPATIDIETLGRYLDAPDIPDPDLIIRT 195

Query: 215 GGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFANRQRRFG 263
            G+ R+SNF++WQAAY+ELVF+   WPDFD+ A   AIA ++ R+RRFG
Sbjct: 196 SGEQRLSNFLMWQAAYSELVFVPIHWPDFDKAALEGAIAEYSRRERRFG 244