Pairwise Alignments

Query, 275 a.a., undecaprenyl diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 229 a.a., UDP diphosphate synthase from Herbaspirillum seropedicae SmR1

 Score =  245 bits (625), Expect = 7e-70
 Identities = 127/232 (54%), Positives = 161/232 (69%), Gaps = 5/232 (2%)

Query: 44  MDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLFAFSSENWRRPDKEVSL 103
           MDGNGRWA  +  PRV GH  GV AVR  V A ++ GI+ LTLFAFSSENWRRP  EVS+
Sbjct: 1   MDGNGRWATKRFLPRVAGHAKGVDAVRSIVEACAERGIEFLTLFAFSSENWRRPADEVSV 60

Query: 104 LMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRAAEEKTAGNSGLILNVAAN 163
           LM LF TVL+RE+  +  N ++L I+GD+SRF  +LQ+    AE +TA NS L L V AN
Sbjct: 61  LMRLFMTVLEREVGKMAANGIRLKIVGDMSRFDPKLQEMAAKAEAQTAANSRLTLTVCAN 120

Query: 164 YGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQSEVDLIIRTGGDYRISNF 223
           YGGRWD++QA  K+  K + G    + FTEE L+ +L M    E DL IRTGG+ RISNF
Sbjct: 121 YGGRWDVMQAVSKMI-KDKPGH---ADFTEEELAPYLAMAYAPEPDLFIRTGGEQRISNF 176

Query: 224 VLWQAAYAELVFLDTLWPDFDEQAFHEAIATFANRQRRFGLTGSQI-DEMRA 274
           +LWQ AY+EL F +T WPDFD +A   AIA++  R+RRFG T +Q+ D+ +A
Sbjct: 177 LLWQLAYSELYFTETFWPDFDAKALDLAIASYQQRERRFGRTSAQVLDQKKA 228