Pairwise Alignments

Query, 283 a.a., translation elongation factor Ts (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 287 a.a., translation elongation factor Ts (EF-Ts) from Pseudomonas syringae pv. syringae B728a

 Score =  266 bits (681), Expect = 3e-76
 Identities = 147/284 (51%), Positives = 198/284 (69%), Gaps = 4/284 (1%)

Query: 3   ISAAQVKELRERTGAGMMDCKKALEETNGDMELAIDNMRKSGAAKAAKKAGNIAADGTIL 62
           I+AA VKELRERTG GMMDCKKAL +  GD+E AID+MR SGA KAAKKAGN+AA+G I 
Sbjct: 4   ITAALVKELRERTGEGMMDCKKALTKAGGDIEKAIDDMRASGAIKAAKKAGNVAAEGAIA 63

Query: 63  IKNGEGFAVLLEVNCQTDFVAKDANFLGFANAVLDVAAASKVT-LEDLKAQFEEARVALV 121
           IK+    AV++EVN QTDF+A   +F  F  A ++ A A K+T +  L    E AR+ LV
Sbjct: 64  IKDDGKAAVIIEVNSQTDFLALQDDFKAFVAASVEKAFADKLTDVAPLIEAQEAARLVLV 123

Query: 122 AKIGENINVRRVEYIDGAKLASYRHGERIGVVVT-GDADEETLKHLAMHVAASKPEYVNP 180
            K+GEN+N+RR++ I+G  + +Y HG +IGVVVT    D E  K +AMHVAAS PE++ P
Sbjct: 124 GKVGENVNIRRLKRIEGDVVGTYLHGNKIGVVVTLKGGDVELAKDIAMHVAASNPEFLFP 183

Query: 181 EDVPADVVAREQ--ALQIEISMNEGKPADIAEKMVVGRMKKFTGEISLTGQAYIMEPKKT 238
            +V A+ + RE+   LQ+     +GKPA+I EKMV GR+ KF  E SL  QA++  P+  
Sbjct: 184 SEVSAEAIEREKNVFLQLNEDKIKGKPAEIVEKMVGGRITKFLAEASLVEQAFVKNPEVK 243

Query: 239 VGEFLKEKGAKVTNFIRLEVGEGIEKKEEDFAAEVAAQIAASKK 282
           VG+  K+ GA++ +F   +VG+GIEK  ++FA EVAAQ+AA+K+
Sbjct: 244 VGDLAKKAGAEIVSFTYFKVGDGIEKPVDNFADEVAAQLAAAKQ 287