Pairwise Alignments

Query, 267 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 234 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  144 bits (362), Expect = 2e-39
 Identities = 91/245 (37%), Positives = 119/245 (48%), Gaps = 42/245 (17%)

Query: 5   LTIAATVLVLAILAVGVYRFNMTNDDIYMVMEDGQVLQYDEAMAKADAKAQAKEAELASR 64
           L +   +LVL +LA GVYRFN TNDD+Y+V EDG V+  DE + K               
Sbjct: 16  LLLIVGLLVLVVLA-GVYRFNFTNDDLYVVKEDGSVIPLDEDVDK--------------- 59

Query: 65  EDAIESVVPSEVKPVVNASEVMLKLFSLNTANPFEVSLPDSHKAVVLTHFINVKQTEFAI 124
                               VML LFS+ T   + + LP+S     LT         FA 
Sbjct: 60  --------------------VMLTLFSIKTHKAWSIKLPESQAEARLTSISLSGDRRFAS 99

Query: 125 GDYQDGEAKGRVLLDYLRITPLNFDPALEPDTQSDAPLQDDPQQQTMPFVAPFIVTNQGS 184
           GDYQDG  +G V LDY++I  LN           D     D     M FVAPF V+NQGS
Sbjct: 100 GDYQDGPERGSVHLDYMKIVTLNHV------ADGDEERVSDTNSDEMLFVAPFFVSNQGS 153

Query: 185 GVFWYLGLFSLDYGHNRLQHLGSVFIGDRIEVDNIEPVYPFEAPFRVAVTYRERAADQPM 244
           GVF YLGLFS+++    ++ L S FIGDR+E+  ++   PFE    V+++Y      Q M
Sbjct: 154 GVFAYLGLFSINHKLGDIEQLDSYFIGDRVEISALQTEEPFELTSSVSLSYLTHGDQQAM 213

Query: 245 TTPPS 249
              P+
Sbjct: 214 AEAPT 218