Pairwise Alignments

Query, 486 a.a., NOL1/NOP2/sun family putative RNA methylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 454 a.a., Fmu (Sun) (RefSeq) from Shewanella amazonensis SB2B

 Score =  431 bits (1109), Expect = e-125
 Identities = 227/459 (49%), Positives = 292/459 (63%), Gaps = 31/459 (6%)

Query: 48  PQTPAQKRAMSYANTTKLLFDEILSAKQPADRVLANYFREHKKHGSKDRKVIRESLFSLF 107
           P + A++RA+SYANT  LL   I   ++ ADRVLANYFREHKKHGSKDRK+IRE+LF LF
Sbjct: 6   PLSSAERRAISYANTLHLLVSHIFKQREGADRVLANYFREHKKHGSKDRKLIRETLFGLF 65

Query: 108 RWWGWFK---AAGD---------------HQQAAHFFAMLSASALLEAHPWQDIAQAWHE 149
           RWWGW K   AA D                  +  +F  LS  A +E H WQDI   W  
Sbjct: 66  RWWGWLKNLPAADDANANIEDSGFSSGLGEAHSPRWFTQLSLVAAIENHQWQDIRSGW-- 123

Query: 150 LSQSTHDYQRLQSI---PVNNLTDKLALVRQLFPQVVLELTDLLPEWFWQVCPIDAKRRP 206
           LSQ+      + +    P N      AL++Q   +      +LLP+W W+   +    + 
Sbjct: 124 LSQANLSQLEIPAFGDTPENLNIICAALIKQFGGEFAPP--NLLPDWAWEHISVAGSDKL 181

Query: 207 NLIEAMSSRPPIWGRAQSINSQTAVSQLQALGIEASLSPFFEDAINLGSKSMNLNEITLY 266
             ++A+  RPP+W RAQ  + +  + QL+A  I A  S  F DAI L S+S+NL+ +T Y
Sbjct: 182 AFVDALCRRPPLWTRAQGTSREQVLKQLEADDIGAVPSKVFADAIELASQSINLDAVTAY 241

Query: 267 KEGNIEIQDLASQVIGQICAPEPWQHWWDACSGAGGKTLQLRSLMQTAATKQHTPLQGSI 326
             G +E+QDLASQ IG++ AP+  + WWDAC+GAGGK+LQL SLMQ           G +
Sbjct: 242 TSGKLEVQDLASQAIGEVAAPKAGERWWDACAGAGGKSLQLFSLMQKRGGV------GEL 295

Query: 327 VSSDIRANALEELSKRAQRAQFDGISIARWRSDALPVAANYFDGVLVDAPCSCTGTWRRN 386
           V+SDIR  ALEEL +RA +A    I ++ WRSD LPV A+YFDGVLVDAPCSCTGTWRRN
Sbjct: 296 VASDIRPKALEELLRRADKAGVAPIQLSPWRSDKLPVKADYFDGVLVDAPCSCTGTWRRN 355

Query: 387 PDMRWLDTLDAVMDKATLQLDILSRSSQAVKAGGTLIYATCSLSPVENEEVVSAFLQQHP 446
           PDMRW+D   A++DK  LQLDIL R+S AV++GG L+YATCSL+  ENE VV AFL    
Sbjct: 356 PDMRWIDDASAILDKPALQLDILRRASAAVRSGGVLVYATCSLARAENEAVVEAFLASDE 415

Query: 447 EFNLVPIRHPFTGEQTEMLTVWPFEANTDGMFVARMQRK 485
           +F L    HPF+GE   ++T+WP +AN DGMFVARM+R+
Sbjct: 416 DFELDTTAHPFSGEHCAVMTLWPQQANADGMFVARMRRR 454