Pairwise Alignments

Query, 486 a.a., NOL1/NOP2/sun family putative RNA methylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 403 a.a., rRNA methyltransferase-like protein from Phaeobacter inhibens DSM 17395

 Score =  137 bits (344), Expect = 9e-37
 Identities = 122/445 (27%), Positives = 194/445 (43%), Gaps = 57/445 (12%)

Query: 50  TPAQKRAMSYANTTKLLFDEILSAKQPADRVLANYFREHKKHGSKDRKVIRESLFSLFRW 109
           TPA +R  +       + D IL+  +PA++ L  + R  +  GSKDR  +R+ +F+  R 
Sbjct: 2   TPAARRQAAIE-----ILDHILTG-EPAEKALTAWARRSRFAGSKDRAAVRDHVFAALRC 55

Query: 110 WGWFKAAGDHQQAAHFFAMLSASALLEAHPWQ----DIAQAWHELSQSTHDYQRLQSIPV 165
              + A G    A       +    L     +    D+A+ +  +  +    +  +   +
Sbjct: 56  LRSYAALGGGGGAGEISDSNTTGRQLMLGALRAEGVDVAEIFSGVGHAPAPLEPAEEAAI 115

Query: 166 NNLTDKLALVRQLFPQVVLELTDLLPEWFWQVCPIDAKRRPNLIEA----MSSRPPIWGR 221
           +          Q+ P  VL++    P+W W   P  A    +  EA    +  R P+  R
Sbjct: 116 STAP-------QMQPTEVLDI----PDWLW---PAFAASLGDAAEAAARALQQRAPVHLR 161

Query: 222 A--QSINSQTAVSQLQALGIEASLSPFFEDAINLGSKSMNLNEITLYKEGNIEIQDLASQ 279
              +  +   A+  L   GI A   P  + A+++   +  L   + Y  G +E+QD ASQ
Sbjct: 162 VNQRKTDRDAALIALSEEGILAEAHPAADTALSVTEGARKLRNSSAYLTGLVELQDAASQ 221

Query: 280 VIGQICAPEPWQHWWDACSGAGGKTLQLRSLMQTAATKQHTPLQGSIVSSDIRANALEEL 339
            + +       Q   D C+G GGK+L + +    A           + + DI    +++L
Sbjct: 222 AVIEALPLADGQRVLDFCAGGGGKSLAIAARGNLA-----------VFAHDIAPQRMKDL 270

Query: 340 SKRAQRAQFDGISIARWRSDALPVAANYFDGVLVDAPCSCTGTWRRNPDMRWLDTLDAVM 399
             RA RA   G +I     D +   A  FD VL DAPCS +G+WRR P+ +W  T   + 
Sbjct: 271 PARADRA---GAAITVLAPDDVAAKAP-FDLVLCDAPCSGSGSWRRAPEGKWRLTQARLD 326

Query: 400 DKATLQLDILSRSSQAVKAGGTLIYATCSLSPVENEEVVSAFLQQHPEFNLVPIRHPFTG 459
           D    Q  IL+ +SQ V  GGTL YATCS+   EN + V+AFL ++P +           
Sbjct: 327 DLCQTQAQILNDASQLVATGGTLAYATCSMLNAENCDQVAAFLARNPNW----------- 375

Query: 460 EQTEMLTVWPFEANTDGMFVARMQR 484
            Q +    W     TDG +VA + R
Sbjct: 376 -QLQQDHGWQVHGGTDGFYVAVLSR 399