Pairwise Alignments

Query, 486 a.a., NOL1/NOP2/sun family putative RNA methylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 475 a.a., Fmu (Sun) domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  499 bits (1284), Expect = e-145
 Identities = 259/459 (56%), Positives = 322/459 (70%), Gaps = 14/459 (3%)

Query: 35  LSSTTIHSAFNIEPQTPAQKRAMSYANTTKLLFDEILSAKQPADRVLANYFREHKKHGSK 94
           + S  +H A N   Q+ A+KRA+SY+ T   LF + L +K P DR+LA+YFR HKKHGSK
Sbjct: 21  IGSEQLHQALNA--QSGAEKRALSYSLTIHQLFCQTLQSKLPGDRILADYFRAHKKHGSK 78

Query: 95  DRKVIRESLFSLFRWWGWFKAA---GDHQQAA--HFFAMLSASALLEAHPWQDIAQAWH- 148
           DR+VIRE+LF LFRW GW K      D QQA    +FA L+ +A LEAHPW DI  AW  
Sbjct: 79  DRRVIRETLFGLFRWHGWLKLIPLKDDSQQAITQQWFAQLAMTAALEAHPWLDIVSAWRG 138

Query: 149 --ELSQSTHDYQRLQSIPVNNLTDKLALVRQLFPQVVLELTDLLPEWFWQVCPIDAKRRP 206
             EL +   +         + L  K A++   FP  V  LT L P+WFW     D + + 
Sbjct: 139 FAELDEPAINAHTDSGSDTDALKFKQAILEAAFPAQVFPLTALAPDWFWAHFDQDLEIQE 198

Query: 207 NLIEAMSSRPPIWGRAQSINSQTAVSQLQALGIEASLSPFFEDAINLGSKSMNLNEITLY 266
            L+ ++SSRPPIWGR Q I+   A ++L    IEAS S +F+DAINLG KS+NLN + LY
Sbjct: 199 RLVSSLSSRPPIWGRLQGISLAKAKAKLAQQEIEASGSDYFKDAINLGHKSINLNAVALY 258

Query: 267 KEGNIEIQDLASQVIGQICAPEPWQHWWDACSGAGGKTLQLRSLMQTAATKQHTPLQGSI 326
            EG +EIQDL SQVIG ICAP+  + WWDACSGAGGK+LQLRSLM     +Q +   GS+
Sbjct: 259 NEGKLEIQDLGSQVIGNICAPKADETWWDACSGAGGKSLQLRSLM----LQQDSEASGSV 314

Query: 327 VSSDIRANALEELSKRAQRAQFDGISIARWRSDALPVAANYFDGVLVDAPCSCTGTWRRN 386
           V+SDIR   LEEL+KRA+RA F  IS   W+SDALPVAA YFDGVLVDAPCSCTGTWRRN
Sbjct: 315 VASDIRRKPLEELTKRAKRAGFSQISTQPWQSDALPVAAGYFDGVLVDAPCSCTGTWRRN 374

Query: 387 PDMRWLDTLDAVMDKATLQLDILSRSSQAVKAGGTLIYATCSLSPVENEEVVSAFLQQHP 446
           PDMRWLD   A+ DKA+LQLDILSR+ +AV+ GG L+YATCS+SPVEN+EVV AFL + P
Sbjct: 375 PDMRWLDDASAITDKASLQLDILSRACEAVRPGGVLVYATCSISPVENQEVVEAFLAKRP 434

Query: 447 EFNLVPIRHPFTGEQTEMLTVWPFEANTDGMFVARMQRK 485
           +F+L  + HPFT E T+MLTV P++A++DGMFVA+M R+
Sbjct: 435 DFSLQTLTHPFTNEVTQMLTVLPYQADSDGMFVAKMIRQ 473