Pairwise Alignments

Query, 486 a.a., NOL1/NOP2/sun family putative RNA methylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 429 a.a., 16S rRNA m5C967 methyltransferase from Klebsiella michiganensis M5al

 Score =  114 bits (286), Expect = 5e-30
 Identities = 80/280 (28%), Positives = 138/280 (49%), Gaps = 16/280 (5%)

Query: 208 LIEAMSSRPPIWGRAQSINSQ--TAVSQLQALGIEASLSPFFEDAINLGSKSMNLNEITL 265
           ++EA + RPP+W R   ++    + ++ L+  G++    P + DA+ L +  + ++ +  
Sbjct: 164 IVEANNQRPPMWLRVNRVHHSRDSWLALLEEAGMKGFTHPAYPDAVRLETP-VPVHALPG 222

Query: 266 YKEGNIEIQDLASQVIGQICAPEPWQHWWDACSGAGGKTLQLRSLMQTAATKQHTPLQGS 325
           ++ G + +QD ++Q       P+  ++  D C+  GGKT  +   ++ A   Q   +   
Sbjct: 223 FEAGWVTVQDASAQGCMTFLDPQNDEYILDLCAAPGGKTTHI---LEAAPEAQVLAVDVD 279

Query: 326 IVSSDIRANALEELSKRAQRAQFDGISIARWRSDALPVAANYFDGVLVDAPCSCTGTWRR 385
                   + L+ L  +A   Q DG   A+W  +        FD +L+DAPCS TG  RR
Sbjct: 280 EQRLSRVYDNLKRLGMKATVKQGDGRYPAQWCGE------QQFDRILLDAPCSATGVIRR 333

Query: 386 NPDMRWLDTLDAVMDKATLQLDILSRSSQAVKAGGTLIYATCSLSPVENEEVVSAFLQQH 445
           +PD++WL     + + A LQ +IL      +K+GGTL+YATCS+ P EN + + AFLQ+ 
Sbjct: 334 HPDIKWLRRDRDIAELAQLQAEILDAVWPHLKSGGTLVYATCSVLPEENSQQIKAFLQRT 393

Query: 446 PEFNLVPIRHPFTGEQTEMLTVWPFEANTDGMFVARMQRK 485
            +  L          Q  +    P     DG F A++ +K
Sbjct: 394 ADAVLNETGDADLPGQQNL----PGAEQGDGFFYAKLIKK 429