Pairwise Alignments

Query, 598 a.a., peptidase, M1 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 891 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  102 bits (253), Expect = 9e-26
 Identities = 109/429 (25%), Positives = 171/429 (39%), Gaps = 47/429 (10%)

Query: 27  HLSLTLTVDFEARTLLGEAVLSLRYIESQVAELWLDTRGLAILSV---------MTEAQV 77
           H SL + VD E     G   + ++ ++     LWL  + L +            +T   V
Sbjct: 42  HYSLAIKVDPEQAQFSGRTTIRVQ-LKQASDHLWLHGKELKVSKATVKPAKGKALTARYV 100

Query: 78  PLEFSLEESNEILGQKLSIRLPQLQCERVCIRYLTSMQAQGLQWLAPEQTAGKQLPYLFS 137
             +          G+ L    PQ     +      + Q QGL  +  +  A     Y  +
Sbjct: 101 DADAQAGVVRLDFGRTLK---PQTLTVDITYSAPLNQQLQGLYQVKYQGKA-----YAMT 152

Query: 138 QSQPINARSWIPLQDTPKVRITFDAKVQVPKGMRAVMSAMNHPETPLEG---TFQFEMEK 194
           Q +PI+AR   P  D P  +  FD  + VP   +A+ + +     P      T  F    
Sbjct: 153 QMEPISARYAFPSFDEPAFKTPFDLSLTVPADDQALANTIATSTKPAGKGWKTVSFAPTL 212

Query: 195 PIPTHLLALAVG-----DLAFQVIGPRSGVYTEPCMLEAAATEFADTEHMLDVAQSLLGP 249
           P+PT+L+A A G     D+      P+    T P    AA  +       LD   +++  
Sbjct: 213 PLPTYLVAYAAGPWDVVDVPAMPATPQRPTST-PLRGIAAQGQGPRITPALDQTPAIIAA 271

Query: 250 ----YAWGR-YDMI--ILPPSFPFGGMENPRLAFLTPTLIAGDKSL--------VSTVAH 294
               YA+G  +D +  +  P F  G MENP        L+  DK           +T AH
Sbjct: 272 LEDYYAFGYPFDKLDLVAAPDFSAGAMENPGFVTFRDWLLLLDKDSPAENVQRSFNTNAH 331

Query: 295 ELAHSWTGNLVSNATWRDLWLNEGFTTYFTNRIVEQVYGREQAELEWV--IEFGRLQEEI 352
           ELAH WTG+ V+ A W DLWLNE F T+   +I  Q++   +A L+ +   +     + +
Sbjct: 332 ELAHQWTGDTVTMAWWDDLWLNEAFATWMQQKITMQLHPEYRANLDRIGGAQHAMDNDSL 391

Query: 353 AALPLHRQTLPANVQQADPNLAFNRFTYDKASMFVHDLERRLGRAEFDKFLFTYVQHFAF 412
            +    RQ +  N    D   AF+  TY K +  +   E  +G   F + +  Y+    F
Sbjct: 392 VSARKIRQPITGN---GDIETAFDGITYQKGAAVLAMFEGFVGEDVFREGMRAYIAKHKF 448

Query: 413 KAITTEMFV 421
            + T +  V
Sbjct: 449 GSATADGLV 457